Gene Information

Name : Amet_4046 (Amet_4046)
Accession : YP_001321787.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Unknown
Product : phage-associated helicase
Function : -
COG functional category : K : Transcription
COG ID : COG0553
EC number : -
Position : 4130653 - 4131897 bp
Length : 1245 bp
Strand : -
Note : KEGG: bca:BCE_0386 phage-associated helicase

DNA sequence :
TTGTCGTCTATTTACAGTCTATGCCTTGATAGATTTGAAATCAGAAAAGTACTGATTATAGCCCCTTTAAGAGTGGCAAG
GGATACTTGGCCTTCTGAAATTAAAAAGTGGGATCATCTAAAAGGCTTATCCTATTCTGTAGCTGTTGGAACTGAAAAAG
AGAGAAAAGATGCCCTTAGGAAAAGAGCCACACTTTATATCATCAATCGTGAAAATATAGATTGGCTTGTAAACAAAAGT
GGCATCCCCTTTGACTTTGATATGGTGGTTATTGATGAGTTATCATCTTTTAAATCATACAGTGCTAAGCGTTTTAAAAG
CCTTCTAAAAGTAAGACCTAAAGTAAAAAGAATTGTTGGGTTGACGGGTACACCTTCAAGTAATGGGCTTATGGATCTCT
GGGCCGAGTTTCGTATTCTGGATTTGGGACAGAGGCTTGGTAGGTACATAACTCACTACCGTAATACCTACTTCATACCG
GATAAACGCAATGGTCAGATCATCTTTTCATATAAACTCCTGCCAGGAGCAGAAGAAAAGATCTATAGTCAGATATCCGA
TATCACCATTTCTATGAAGTCCATTGATTATCTAAAAATGCCTGAATGCGTAATAAACACAGTGCCTGTGTATTTAAATG
AAAAAGAGCGGGCCATTTATTCTGGATTTAGAGATGATATGGTAGCAAGTTTAGGAGCAGAAGAAATCGATGCAGTAAAT
GCTGCAGTACTTTCAGGAAAACTCCTTCAGATGGCAAACGGTGCTGTCTATGACGAGAAGAACAAGGCGCATTTTATTCA
CGATAGAAAACTTGATGCCCTTGAAGATTTAATTGAAGGGGCTAACGGAAAACCAGTCCTTATAGCTTATTGGTTTAAGC
ATGATCTTGATCGGATTCAGAAGAGATTTCCAGCAAGGCAGCTAAAGTCATCAAGAGATATTGAAGAGTGGAATGAAGGA
GAAATTCCTGTAGCAGTGATCCACCCTGCAAGTGCTGGACATGGACTTAACCTTCAAAGTGGTGGTTCCACACTTGTTTG
GTTTGGACTCACCTGGTCATTGGAACTCTATCAGCAAACCAATGCTCGCCTCTACAGACAAGGGCAAAAGGATACTGTTG
TCATTCACCACATCATTACCAAGGACACCATAGATGAAGATGTGATGACAGCACTTACAAAAAAAGAAAAAACACAAGCA
TCTTTAATCGATGCTGTAAAAGCTAAGCTGGAGGTGAAGCAATGA

Protein sequence :
MSSIYSLCLDRFEIRKVLIIAPLRVARDTWPSEIKKWDHLKGLSYSVAVGTEKERKDALRKRATLYIINRENIDWLVNKS
GIPFDFDMVVIDELSSFKSYSAKRFKSLLKVRPKVKRIVGLTGTPSSNGLMDLWAEFRILDLGQRLGRYITHYRNTYFIP
DKRNGQIIFSYKLLPGAEEKIYSQISDITISMKSIDYLKMPECVINTVPVYLNEKERAIYSGFRDDMVASLGAEEIDAVN
AAVLSGKLLQMANGAVYDEKNKAHFIHDRKLDALEDLIEGANGKPVLIAYWFKHDLDRIQKRFPARQLKSSRDIEEWNEG
EIPVAVIHPASAGHGLNLQSGGSTLVWFGLTWSLELYQQTNARLYRQGQKDTVVIHHIITKDTIDEDVMTALTKKEKTQA
SLIDAVKAKLEVKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2070 YP_002747285.1 SNF2 family phage protein Not tested ¥ÕSeq4 Protein 2e-90 53
SAUSA300_1408 YP_494105.1 phage helicase Not tested ¥ÕSa2 Protein 2e-94 51
MW1405 NP_646222.1 hypothetical protein Not tested ¥ÕSa2 Protein 3e-94 51
SAOV_0314 YP_005735831.1 putative DNA helicase Not tested ¥ÕSa1 Protein 1e-93 51
SH1779 YP_253694.1 hypothetical protein Not tested ¥ÕSh1 Protein 5e-90 50