Gene Information

Name : Amet_0033 (Amet_0033)
Accession : YP_001317935.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 44256 - 44696 bp
Length : 441 bp
Strand : +
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: ctc:CTC00108 single-strand binding protein

DNA sequence :
ATGAATAGAGTAGTAATGATTGGACGTCTTGCAAGAGACCCAGAGTTACGTTTTACTGCAAGCGGAAAAGCGGTAGCCAC
CTTTAGTATTGCAGTGAACAAAACCTTTTCTAAGGAGAAGCAAGCAGATTTTTTCAATGTTGTTGTATGGAATAAAACTG
CTGAAAACTGTGCTAATTATTTAGCAAAGGGAAGGTTAGTAGGACTAGATGGTAGGCTTCAAAGCCGATCCTATGAAACT
AAAAATGGAGATAAACGATACGTTACAGAAATTGTAGCAGATCAAGTTGAATTTTTGGAATGGGGAGATAAAAATTCTCA
GCCGAATCAAACGAGCCAAAAACCTAAACAAGATTTTGGTAAATCAGATGATTTCAATTCAGCGGATATAGATATTAATG
ATTTCCAAGCCATCGACGAAGACGATGACATTCCATTCTAG

Protein sequence :
MNRVVMIGRLARDPELRFTASGKAVATFSIAVNKTFSKEKQADFFNVVVWNKTAENCANYLAKGRLVGLDGRLQSRSYET
KNGDKRYVTEIVADQVEFLEWGDKNSQPNQTSQKPKQDFGKSDDFNSADIDINDFQAIDEDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 1e-26 60
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 2e-24 59
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 8e-27 59
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 4e-25 58
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 8e-20 51
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 6e-27 49
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 3e-25 42
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 4e-25 42