Gene Information

Name : Amet_3926 (Amet_3926)
Accession : YP_001321678.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 4030955 - 4031593 bp
Length : 639 bp
Strand : -
Note : KEGG: dsy:DSY1145 hypothetical protein

DNA sequence : 
ATGATAGGACCAGATAAGAAAAAGCTATATCCAAATGAAAACATAAAAACAGTTTGTTATATAAGTAATTTGCCTAAACG
GGCAAATGTTGAGATCGGAGATTATACTTACTATAGTGATAATAAAAAGTGTCCAGAGAAATTTTATGATAACATAGAGC
ACCACTATGAATTCTTGGGAGATAAACTCATTATAGGCAAGTTCTGTGCAATTGCAGAGGGTGTTAACTTTATTATGAAT
GGTGCAAACCATAGAATGGATGGGATTACAACTTATCCCTTTAATATATTTGGCGGTGGTTGGGAAAAAGTCACTCCAAC
AGTAGAAGACTTACCATTTAAGGGTGATACAGTGATTGGAAATGATGTATGGATAGGTCAATATGTAACAATTATGCCGG
GCATTAAAATTGGTGATGGTGCGATTATTGCTGCTAATTCAACAGTAGTAAAAGATGTTGAACCTTACGCAATATATGGT
GGGAATCCAGCAAAATTTATAAAGAAACGCTTTAACGATGAACAAATTGAGTTATTGCTAAAGCTTCAATGGTGGAACTG
GGATGAAGAAAAGATATTTGATAATCTTGAAATGCTAACATCAAAATTGGGTTTAGAAAAATTAACGGAACGTTTATAA

Protein sequence : 
MIGPDKKKLYPNENIKTVCYISNLPKRANVEIGDYTYYSDNKKCPEKFYDNIEHHYEFLGDKLIIGKFCAIAEGVNFIMN
GANHRMDGITTYPFNIFGGGWEKVTPTVEDLPFKGDTVIGNDVWIGQYVTIMPGIKIGDGAIIAANSTVVKDVEPYAIYG
GNPAKFIKKRFNDEQIELLLKLQWWNWDEEKIFDNLEMLTSKLGLEKLTERL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 7e-25 54
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 7e-25 54
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 1e-24 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amet_3926 YP_001321678.1 hypothetical protein AF322577.2.gene4.p01 Protein 4e-25 54
Amet_3926 YP_001321678.1 hypothetical protein AY740681.1.gene5.p01 Protein 4e-25 54
Amet_3926 YP_001321678.1 hypothetical protein AY123251.gene2.p01 Protein 5e-25 53
Amet_3926 YP_001321678.1 hypothetical protein AM180355.1.gene2499. Protein 1e-31 45
Amet_3926 YP_001321678.1 hypothetical protein CP001581.1.gene990.p Protein 3e-25 42