Gene Information

Name : Amet_3893 (Amet_3893)
Accession : YP_001321651.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Unknown
Product : binding-protein-dependent transport system inner membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2011
EC number : -
Position : 4002620 - 4003297 bp
Length : 678 bp
Strand : -
Note : PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pin:Ping_3537 ABC transporter substrate binding inner membrane protein

DNA sequence :
ATGGAGCTAGTAAATCAAATGCTACCCAATGTAGTTGAATTGTTTCCTGAGTTAGTTAAAGCATTTATGGATACCTTGAT
TATGGTTTTTATATCTGGATTAATTGCCTCCATAATCGGAATTCCTTTAGGTGTAATCTTAGTTATTACAAGAAAAGGGA
ATCTGGTGGAAAATAAATTGATAAATTTTATATTGGGAAAGGTAGTGAATATATTTAGATCTTTACCTTTTGTAATTTTG
TTAACGGCCATTATACCTATTACAAGATTTTTAGCTGGCACAACAATAGGTCTTAGGGGTGCAATAATACCTCTAATATT
TGCCTCCGCTCCCTTTGTGGCACGGCAGGTGGAGTCAGCACTGTTAGATATAGATCCAGGAGTTATTGAAGCAGCACAGG
CCATGGGATCTAGCCCCTTTGAAATAATCTATAGGGTATTACTTGTGGAGGGCTTACCTGGAATCATATATGCTTTAACC
ATAACCGTCGTTAGCTTAATCGGTTTTTCTGCCATAGCTGGAACGGTGGGAGGTGGAGGTCTTGGGGATTTCGCTATACG
ATACGGTTATCAATATTATAGAACTGACATCATGATTGTAAGCACAATAATTTTGCTGCTGATCGTAAATGTTGTTCAAA
GTACAGGGGAATATTTTCAAAAGAAATTAAGTCACTAA

Protein sequence :
MELVNQMLPNVVELFPELVKAFMDTLIMVFISGLIASIIGIPLGVILVITRKGNLVENKLINFILGKVVNIFRSLPFVIL
LTAIIPITRFLAGTTIGLRGAIIPLIFASAPFVARQVESALLDIDPGVIEAAQAMGSSPFEIIYRVLLVEGLPGIIYALT
ITVVSLIGFSAIAGTVGGGGLGDFAIRYGYQYYRTDIMIVSTIILLLIVNVVQSTGEYFQKKLSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0462 YP_039911.1 transport system membrane protein Not tested vSa¥á Protein 1e-22 51
SAS0420 YP_042547.1 transport system membrane protein Not tested vSa¥á Protein 1e-22 51