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Name : Amet_3796 (Amet_3796) Accession : YP_001321574.1 Strain : Alkaliphilus metalliredigens QYMF Genome accession: NC_009633 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 3910668 - 3911981 bp Length : 1314 bp Strand : - Note : TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: tma:TM1667 xylose isomerase DNA sequence : ATGAGAGAACACTTTTTGGAAATTAATAAAATAAAATTTGAGGGGGGAGATTCAACTAATCCTTTAGCATTTAAATATTA TGATGCTAATCGTATCGTAGCAGGTAAAAAGATGAAGGATCACTTGAGATTTGCCCTCAGCTATTGGCATACCCTCACTG GTAATGGAACTGATCCCTTTGGGCAGCCTACAATGGAAAGAGACTATAATAGTTTAGATGGTATAGAGTTATCTAAGGCA AGAGTGGATGCAGCATTTGAACTTATGACAAAGTTAGGAATCGAATTTTTTTGTTTTCACGATTTGGATATTGCACCTGA AGGGAATTCACTACAAGAAAAGCTGGACAATTTAGATACGATACTTGAACGTATAGAAGATAAAATGAAGGAGACAGGTA TAAAATGTTTATGGGGCACTACTAACGCCTTTAGTCATCCTCGATTTATGCATGGGGCTGCGACATCTCCAAATGCAGAT GTATTCGCATTTGCAGCGGCACAGGTAAAGAAGGCATTGGAAATTACTCATCGCTTGAGGGGAGAAAACTATGTTTTTTG GGGTGGTCGTGAGGGTTATGAAACCCTTCTTAATACAGATATTGCTCTTGAAAATGACAATTTAGCTAAGTTCCTAAAAA TGGCAAAGGATTATGCAAGAAATATTGGTTTTGAAGGACAATTTCTTATTGAACCAAAACCGAAGGAGCCAACAAAGCAT CAATATGACTTTGATACAATGACGGTTCTTGGTTTTTTGAGAAAATATAATCTAATCGACGATTTTAAATTAAATATTGA AGCAAATCATGCCACACTGGCAGGACATACATTTCAGCATGAATTAGCCATGGCTCGTATAAATGGGGTATTGGGTAGTG TTGATGCAAATCAGGGAGATCTGCTTCTAGGATGGGACACGGATCAATTTCCAACCAATATTTATGATGCCACCCTATCT ATGTATGAGGTATTAAAAAATGGTGGCATAGCACCAGGTGGACTAAATTTTGATGCTAAGGTGAGAAGGGGATCATTCAA GCCAGATGATTTATTTATCGCTTATATTGTTGGTATGGACACCTTTGCCAAAGGCTTATTGGTGGCTGACAAGCTGTTGA CAGATGGGGTACTGGAAAACTTTGTGACAAAGCGTTATGAAAGTTATACTGCTGGTATCGGCAAGAAAATTATAGAGGAT GCAACAAGTTTTGAGGAACTTGCAGAATATGCCTTAAAGCATGATAAAATTGTACTTGAATCAGGTCGTCAAGAAATGCT GGAGGATATTGTAAATAGATATATATATAAGTAA Protein sequence : MREHFLEINKIKFEGGDSTNPLAFKYYDANRIVAGKKMKDHLRFALSYWHTLTGNGTDPFGQPTMERDYNSLDGIELSKA RVDAAFELMTKLGIEFFCFHDLDIAPEGNSLQEKLDNLDTILERIEDKMKETGIKCLWGTTNAFSHPRFMHGAATSPNAD VFAFAAAQVKKALEITHRLRGENYVFWGGREGYETLLNTDIALENDNLAKFLKMAKDYARNIGFEGQFLIEPKPKEPTKH QYDFDTMTVLGFLRKYNLIDDFKLNIEANHATLAGHTFQHELAMARINGVLGSVDANQGDLLLGWDTDQFPTNIYDATLS MYEVLKNGGIAPGGLNFDAKVRRGSFKPDDLFIAYIVGMDTFAKGLLVADKLLTDGVLENFVTKRYESYTAGIGKKIIED ATSFEELAEYALKHDKIVLESGRQEMLEDIVNRYIYK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 2e-118 | 59 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 2e-118 | 59 |
