Gene Information

Name : Amet_3771 (Amet_3771)
Accession : YP_001321549.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3880544 - 3881332 bp
Length : 789 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cpr:CPR_0797 ferrichrome transport ATP-binding protein FhuC

DNA sequence :
ATGGAAGCTATAAGTGTAAAAAAATTATCAGTAGCATATGAAGAAAATCTAATAATAGATGATATGAATCTTTCAATTCC
AAAGGGAAAGATAAGTATTATTATAGGTGCAAATGGATGTGGAAAATCAACTTTGCTAAAAAGTATTGCAAGGATCATAA
AGCCGAAAACCGGAGAGATTTTTATAAATGGAAAAAACATTAAAACTCAAAAAGAAAAACAGATAGCAACTCAAATCGCC
TTTTTACCCCAAGGGCCAGTTTGTCCAAGTGGAATGACTGTCAAAGAATTAGTCGCTTATGGAAGGTTTCCTCATCAAAA
AATGATAGGTGGTCTTAATGTTCATGATAAAGAAATGATTGATTGGGCAATAGAGGAAACAGGCCTTAAGGATTTTTCCC
ATAGAGAAATCGAAAATCTATCCGGGGGACAAAGACAGAGAGCTTGGATTGCAATGACTTTGGCACAAGAAACAGACATA
ATTATGTTAGATGAGCCAACAACTTATTTAGATATGTCTTATCAACTTGAAGTATTACAAGTATTGGAAAAACTAAATAA
AGATAAAAACATTACGATTGTAATGGTGCTCCATGAATTAAATAATGCATGTAGGTTTGCAAGTAATATTATTGGACTTA
AAAAGGGTGAAATTATTTGTAACGGCGTTCCTATGGAAACAATAACTAAAGAAAACCTAAAAGAGATCTATGGAATTGAT
GTTAAATTACAATTAAGTGATAATAAAAATTACCCCATTTGCGTAGATTATGAACTTCTAAGGGGGTAA

Protein sequence :
MEAISVKKLSVAYEENLIIDDMNLSIPKGKISIIIGANGCGKSTLLKSIARIIKPKTGEIFINGKNIKTQKEKQIATQIA
FLPQGPVCPSGMTVKELVAYGRFPHQKMIGGLNVHDKEMIDWAIEETGLKDFSHREIENLSGGQRQRAWIAMTLAQETDI
IMLDEPTTYLDMSYQLEVLQVLEKLNKDKNITIVMVLHELNNACRFASNIIGLKKGEIICNGVPMETITKENLKEIYGID
VKLQLSDNKNYPICVDYELLRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-48 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-48 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-46 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-46 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-46 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-46 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-46 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amet_3771 YP_001321549.1 ABC transporter-like protein VFG0925 Protein 4e-48 44