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Name : Amet_3482 (Amet_3482) Accession : YP_001321269.1 Strain : Alkaliphilus metalliredigens QYMF Genome accession: NC_009633 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3558895 - 3560580 bp Length : 1686 bp Strand : - Note : PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase; KEGG: tte:TTE1262 predicted ATPases involved in pili biogenesis, PilB homologs DNA sequence : ATGATGCAAAAAAATATGCGTTTAGGGGACATCCTGATTGAAGGAGGTTTGATAACAAAAGATCAACTTAATGAGATACT GAAGCTTCAAAAAATAAAGGGAAAAAAATTAGGAGAGCTTATCGTTGATGAAGGGATTTTAAAAGAAAGTCAGATTCTAG AGGTTTTAGAATTTCAATTGGGCATACCACATATTGATTTAAATAAATATCATATTAATCCTAAGGCAGTTAAGATGATT AATGAAAATATTGCTAGAAAACATAATTTGATTCCAATCAGTATGACTAGAGGTAAGCTTATGGTTGCCATGGCAGACCC TTTAAACTTGATTGCTATAGATGACGTGAAGATCATTACGGGAATTGACATTGAAGTAGTCATTGCTACGAAAAAGGAGA TATTAAATGCTGTCAATAAATATTATGATGGTAAGGAGTATGCGGATAAAGCCGTTGAAGAGTTTAAAACGCAACATGAG TTAGAAGATATAGATGAGTCTGATAGTCAGTTAATGGAGGATGTTAATAATGCACCCATGGTAAGACTCGTTAATCAAGT TATTAGCCAAGCGGTGAAACTAGGAGCCAGTGATGTTCATATTGAGCCATTTGAGGAAAGAGTAAGAATTCGTGTTCGGA TTGATGGAGAACTAAAGGAGATTATGTCTCCTGCAAAATCTACACACTCGGCAATTATCACAAGAATAAAAATCATAGGT AAATTAGACATATCAGAAAAAAGAATTCCTCAGGATGGCAGAGTAGAGACTATTATTGAAAATAGAACGATAGACATGAG AATATCAGTGCTACCAACTGTATATGGAGAAAAGGTAGTGATCAGAATATTAGATAGAAACAATATTATCGTAACAAAAG AACAGCTAGGTTTTACTGAAAGAAACCTGGAATTATTTGATAGAATTATTAAAAGCCCAGAGGGGATTATTCTAGTGACA GGGCCAACTGGAAGTGGCAAAACCACAACCCTCTATACGGTATTAAAGGATCTGAACCAAATAAATAAAAATATCATTAC TGTAGAAGATCCTGTGGAGTACAGACTTGATGGCATTAATCAAGTTCAGGTAAATATAAAGGCAGGTTTAACATTTGTAA CAGGCCTTCGCTCAATACTGAGACAGGACCCTGACATTGTATTGGTAGGTGAAATAAGAGATGCTGAAACTGCACAAATT GCTACTAGAGCTGCGATTACAGGGCATTTGGTTTTAAGTACTTTACATACCAATGATACGGCAAGCTCCATTTCTAGATT AATTGATATGGGAATTGAACCCTACATGGTTTCATCTGCTGTTGTAGGAATAATTGCTCAACGATTGATAAAGAAAATTT GCCCACATTGTAAAATACAGTATGAAGCTACTGACAAGGATAAAAAGTTACTAGGTATAAATGAACCTCTAAATTTATTT AAAGGGAAGGGGTGCAACTCCTGTGGAAATACAGGCTACTCAGGAAGAACTGCCATCCATGAGGTTATGGCAGTGAATAG AGAAATTCGCAATTTAATCAATCATAGGGCTGACATTGATGTCATTAAGGATAACGCCATAAAAAATGGTATGCAAACAC TTCATGAGTCCTGTAAATTGCTTGTCATCAATGGGACAACTACCATTGATGAGTTATTAAAAATAACCTATGGCATCGAC ATATAG Protein sequence : MMQKNMRLGDILIEGGLITKDQLNEILKLQKIKGKKLGELIVDEGILKESQILEVLEFQLGIPHIDLNKYHINPKAVKMI NENIARKHNLIPISMTRGKLMVAMADPLNLIAIDDVKIITGIDIEVVIATKKEILNAVNKYYDGKEYADKAVEEFKTQHE LEDIDESDSQLMEDVNNAPMVRLVNQVISQAVKLGASDVHIEPFEERVRIRVRIDGELKEIMSPAKSTHSAIITRIKIIG KLDISEKRIPQDGRVETIIENRTIDMRISVLPTVYGEKVVIRILDRNNIIVTKEQLGFTERNLELFDRIIKSPEGIILVT GPTGSGKTTTLYTVLKDLNQINKNIITVEDPVEYRLDGINQVQVNIKAGLTFVTGLRSILRQDPDIVLVGEIRDAETAQI ATRAAITGHLVLSTLHTNDTASSISRLIDMGIEPYMVSSAVVGIIAQRLIKKICPHCKIQYEATDKDKKLLGINEPLNLF KGKGCNSCGNTGYSGRTAIHEVMAVNREIRNLINHRADIDVIKDNAIKNGMQTLHESCKLLVINGTTTIDELLKITYGID I |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-98 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-98 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Amet_3482 | YP_001321269.1 | type II secretion system protein E | VFG2048 | Protein | 2e-100 | 46 |
| Amet_3482 | YP_001321269.1 | type II secretion system protein E | VFG1876 | Protein | 3e-96 | 43 |
| Amet_3482 | YP_001321269.1 | type II secretion system protein E | VFG1880 | Protein | 2e-86 | 42 |
| Amet_3482 | YP_001321269.1 | type II secretion system protein E | VFG0182 | Protein | 2e-99 | 41 |
