Gene Information

Name : Amet_3307 (Amet_3307)
Accession : YP_001321095.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Unknown
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3355897 - 3356592 bp
Length : 696 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dsy:DSY3761 hypothetical protein

DNA sequence :
ATGGAAGATAACTTAAAATTATTAATTATTGAAGATGATAAGTATATATTAAACTTCATCTCTCTTTCCTTAAAAACAAG
TGGTTATGCCTTTGAAACCGCCAGAACGGGTCTTGAGGGGATGTCACTATTTTATAGTCATCATCCGGATATCATATTAC
TTGATTTGGGGCTGCCAGATATAGATGGGATCGACGTGATTAAATCAATTCGTATGATTTCACAGGTACCGATCTTAATT
GTATCTGCTAGAGGCCAGGAGAATGAGAAGATTGCTGCCCTAGATGAAGGGGCAGATGATTATATCACAAAGCCCTTTCA
TATGGGAGAGTTAATGGCACGTATTCGTGTTGTGCAGCGAAAGCTAAAAAAGGCAATGCAGCCTGAGAACATTGAGATAT
TTCAGATGGATTACTTAACTATTGACTATGAAAAGAGGATCGTTTTAGTTGACAATAATGAGGTTCATGTAACGCCCATT
GAATATAAACTACTGCTACTTTTGGTGGCCAATAAAGGTAAGGTCCTCACCCACAATTATATTTTAAAGGAAATATGGGG
ATACGGTGAGACTGGTGATTCAAAGTCAATTCGTGTTTTCATGGCAAACCTTCGAAGAAAGATCGAGAAGGATAAAGCAT
CCCCTCGTTTTATTTTGACAGAGGTTGGAGTTGGTTACCGCTTTGCAAATGATTAG

Protein sequence :
MEDNLKLLIIEDDKYILNFISLSLKTSGYAFETARTGLEGMSLFYSHHPDIILLDLGLPDIDGIDVIKSIRMISQVPILI
VSARGQENEKIAALDEGADDYITKPFHMGELMARIRVVQRKLKKAMQPENIEIFQMDYLTIDYEKRIVLVDNNEVHVTPI
EYKLLLLLVANKGKVLTHNYILKEIWGYGETGDSKSIRVFMANLRRKIEKDKASPRFILTEVGVGYRFAND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 7e-32 43
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 5e-32 43
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 9e-28 42
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 9e-28 42
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 9e-28 42
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 9e-28 42
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 7e-28 42
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 7e-28 42