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Name : Amet_0024 (Amet_0024) Accession : YP_001317926.1 Strain : Alkaliphilus metalliredigens QYMF Genome accession: NC_009633 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 36527 - 37807 bp Length : 1281 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATATTAAAAGAATTCGGATGAATCTAGATGAAATTAAGGCAGCCATGGCTAGAAGAGGGGAAAAAGGATTTGA TTTAGATGCTGTTGTTGCATTAGATGAAGACAGAAGAACAATTTTACAAGAAGTAGAGCAAATGAAAAATGAACAAAAAA CAGTTTCAAAGGAAGTACCTAAATTAAAGAAAGAAGGCAAAGATGTCTCTGAAGTAATGGAAAAAATGAAAACCCTCTCG GCAGAAATAAAGAATTTAGATGTGAAGGTAAAAGAAATTGAGGAAAAAATGGAAGAAATACTCTTAAGAATTCCAAATGT GCCCCATCCAGACGTACCTCAAGGAGACACAGATGATGATAATATCGAAGTGAGAACCTGGGGAGAACCAACACAGTTTT CTTTTGAACCAAAACCCCACTGGGAGGTTGGTGTGAATTTAGGAATACTAGATTTTGAAGCGGCTTCAAAGGTAACCGGG TCTCGATTTACACTTTATAGAGGAATGGCAGCTCGGTTAGAAAGAGCATTGATCAGCTTTATGTTGGACCTCCATACAGA TGAGCATGGCTATACAGAGTTATTACCACCCTTTATGGTGAATCGAGCCAGTATGATTGGAACAGGGCAACTGCCTAAAT TTGAAGAGGACGCCTTTAAAATTCCTCAAAAAGACTACTTCTTAGTCCCAACAGCGGAAGTACCAGTAACCAATATTTAT CGAGATGATATTATAGAGGGAGATCAATTGCCCATAAAATATGTAGCCTATACACCTTGCTTTAGATCAGAAGCCGGCTC AGCCGGTAGAGATACCAGAGGACTGATTAGGCAGCATCAATTTAATAAGGTTGAGTTGGTTAAATTTGTGAGACCAGAGG ATTCTTATGAAGAACTAGAGAAATTAACAAATAATGCCGAAAAGGTACTACAGCTTCTAGGACTTCCCTATCGAATCGTT AGGATTTGTACTGGAGACCTAGGGTTCACAGCAGCCTTTAAATATGATATAGAAGTTTGGATGCCAAGCTATAACAGATA TGTAGAGATCTCTTCTTGTAGTAACTTTGAAGACTTTCAGGCAAGAAGAGCCAATATCCGTTATCGACCAGATACAAAAT CTAAGGTGGAGTTCGTTCATACATTAAACGGAAGTGGATTGGCAGTAGGAAGAACAGTAGCAGCCATATTAGAAAACTTC CAACAAGAGGATGGCAGTGTTGTGATCCCAGAAGCCATAAGGTCTTATATGAAGGGTTTTGAAAAAATTACAGCTAAGTA A Protein sequence : MLDIKRIRMNLDEIKAAMARRGEKGFDLDAVVALDEDRRTILQEVEQMKNEQKTVSKEVPKLKKEGKDVSEVMEKMKTLS AEIKNLDVKVKEIEEKMEEILLRIPNVPHPDVPQGDTDDDNIEVRTWGEPTQFSFEPKPHWEVGVNLGILDFEAASKVTG SRFTLYRGMAARLERALISFMLDLHTDEHGYTELLPPFMVNRASMIGTGQLPKFEEDAFKIPQKDYFLVPTAEVPVTNIY RDDIIEGDQLPIKYVAYTPCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVRPEDSYEELEKLTNNAEKVLQLLGLPYRIV RICTGDLGFTAAFKYDIEVWMPSYNRYVEISSCSNFEDFQARRANIRYRPDTKSKVEFVHTLNGSGLAVGRTVAAILENF QQEDGSVVIPEAIRSYMKGFEKITAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-120 | 59 |
