Gene Information

Name : Amet_2808 (Amet_2808)
Accession : YP_001320617.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Unknown
Product : glycine betaine/L-proline ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : -
Position : 2821014 - 2822213 bp
Length : 1200 bp
Strand : +
Note : TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; KEGG: oih:OB3456 glycine betaine ABC transporter ATP-binding protein

DNA sequence :
ATGGCAAAAATTCAAGTCGAGAATCTAATCAAGATTTTCGGTAATCGCCCCGAAAAGGCACTTCAACTATTAAATGAAGG
TGTTTCAAAGGACGAAATTCTAAAGAAAACCAAGCATGCTGTCGGGATAGCTGGCGTAAGTTTTCATGTCAACGAAGGAG
AAGTCTTTGTAGTCATGGGCTTATCTGGTAGTGGTAAGTCGACATTAATTCGTTGTCTTAACAGGTTAATTGAGACTACC
TCTGGCCAGGTCTATTTGGACGGCGAAGACATTGTCAAGATGAATAATGATGAACTGCGAGAAGTGCGTCGTAGTAAGCT
TGGCATGGTATTTCAAAAATTTGCATTGTTTCCCCATAAAACAGTACTTGAAAACGTAGAGTATGGCTTAGAGATTCAAG
GTGTTAATGAGAAGGACCGAAAATCTAAAGCTGTGGATGCATTAAAGTTAGTGGGTCTAGATGGCTGGGGTGACAATTTA
CCAACTCAGCTTAGTGGCGGAATGCAACAACGTGTTGGACTAGCCAGAGCCTTAGCAATTGACCCCGATATTTTACTGAT
GGATGAGGCTTTTAGCGCATTAGATCCTTTAATCCGTAAGGAAATGCAAGACGAACTACTGGAGCTTCAGAGTAAGATGA
ACAAAACAATCATCTTTATTACACACGATTTAGATGAAGCATTAAAAATTGGTGACCGCATTGCGCTGATGAAGGATGGT
TTAATTGTTCAAATTGGTACCCCTGAAGATATTCTGAAGAACCCAGCCAACGATTACGTTGCTCGTTTCGTCGAAGATGT
TGATATGACTAAAGTCCTATCGGCTAAGGATGTCATGATTAAAGCAGTTACGCTAGATGACACTAAGGATGGTCCAAGGG
TAGCCCTGCGTAAAATGAAAACAGAAAAGATCTCTGGTCTTTTTTTAACAGATAAAAAACGCACATTGAAGGGGTATCTT
TCAGCTGATGACGTATCCAGTGCAGTCAAAAAAGATCAGACAAACTTTGAAGGATTAATTCAAACTGATATTATAACAGT
ATCGCCGGATACCATGCTAGTGGAACTATTCCCTCTTATTGCCGATGCAAAAATACCCGTAGCAGTGGTGGATGAAGAAA
ATAAACTCAAGGGTATTATCATTAGAGGAACTGTGTTAGCAGCACTGGCCAGAGGGGAGGATGAATTCAATGATCAGTAA

Protein sequence :
MAKIQVENLIKIFGNRPEKALQLLNEGVSKDEILKKTKHAVGIAGVSFHVNEGEVFVVMGLSGSGKSTLIRCLNRLIETT
SGQVYLDGEDIVKMNNDELREVRRSKLGMVFQKFALFPHKTVLENVEYGLEIQGVNEKDRKSKAVDALKLVGLDGWGDNL
PTQLSGGMQQRVGLARALAIDPDILLMDEAFSALDPLIRKEMQDELLELQSKMNKTIIFITHDLDEALKIGDRIALMKDG
LIVQIGTPEDILKNPANDYVARFVEDVDMTKVLSAKDVMIKAVTLDDTKDGPRVALRKMKTEKISGLFLTDKKRTLKGYL
SADDVSSAVKKDQTNFEGLIQTDIITVSPDTMLVELFPLIADAKIPVAVVDEENKLKGIIIRGTVLAALARGEDEFNDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 1e-105 58