Gene Information

Name : Amet_2523 (Amet_2523)
Accession : YP_001320335.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2562174 - 2563058 bp
Length : 885 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: cth:Cthe_0676 tyrosine recombinase XerD

DNA sequence : 
ATGGATATATTAATAAACAATTTTATCATTTACTTAAAAAATGAAAAGCATCTGTCAACAAATACATTGGAGTCATATAA
AAGAGATGTCAAGCAATTTACAAGCTACTTAGCAGGAAGTGATATCCATGATATAGAAGAAACAACAAAAACCACGATTA
TTACGTATCTATTTTACTTACAAAAGGAGGGGCGTGCTGCCTCTACGATTTCAAGGAGTTTAGCTTCCCTTAGGAGCTTT
TATCATTATTTATTACTACATAAAAAAGTGGATATAGATCCTACGTTTAATTTAGAATCTCCTAAGATGGTGAAAAAACC
ACCTAACATATTAACACTTGAAGAGGTGGAATTGTTGTTACAACAACCATTAAATACTACGCCAAAAGGAATAAGGGATA
AAGCTATGTTAGAATTGCTCTATGCCACCGGAATTCGTGTGACAGAGTTAATCTCATTAAATCTAGAGGATGTTAATGTA
AATCTTGGATATATTAGATGTTGTAATAATACTAAAGAAAGAGTGATACCTATTGGGACCCTTTCTTTGATCGCTTTACA
GAAATACATAAATTATTATCGGGATGCTTTTACTAAAGATAATGAAGAAAAAAGTTTGTTTCTTAATTATCATGGGGGCC
GTTTAACGAGGCAAGGGTTTTGGAAAATTATAAAGGTTTATACAAAGCAAGCAGCTATCGAAAAAAGTATTACACCCCAT
ACATTAAGACACTCCTTCGCAACACACCTCATTGAAAACGGAGCTGACCTTAAATCTGTGCAAGAAATGTTAGGCCATTC
TGATATTTCAACAACTCAGGTATATGCACAGTTAACTAAACATAAAATCAAGGATGTATATAATAAAACCCATCCCAGGG
CCTGA

Protein sequence : 
MDILINNFIIYLKNEKHLSTNTLESYKRDVKQFTSYLAGSDIHDIEETTKTTIITYLFYLQKEGRAASTISRSLASLRSF
YHYLLLHKKVDIDPTFNLESPKMVKKPPNILTLEEVELLLQQPLNTTPKGIRDKAMLELLYATGIRVTELISLNLEDVNV
NLGYIRCCNNTKERVIPIGTLSLIALQKYINYYRDAFTKDNEEKSLFLNYHGGRLTRQGFWKIIKVYTKQAAIEKSITPH
TLRHSFATHLIENGADLKSVQEMLGHSDISTTQVYAQLTKHKIKDVYNKTHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-41 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-41 44