Gene Information

Name : Amet_2325 (Amet_2325)
Accession : YP_001320141.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2394098 - 2394787 bp
Length : 690 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sth:STH2007 two-component response regulator

DNA sequence :
ATGGTATACAAATTGCTAGTTGTTGACGATGAACCGTTATTAGTGAAAGGATTGAGATATAGTCTTGAACAAGATGGGTA
CGAAATATTATCTGCCTCTGATGGCGAAGAGGCCTTAGATAAATTTAATAAAGGGTCCTTCGATTTAATCATTTTAGATT
TAATGCTACCTAAAATCGACGGATTGGAGGTGTGTCAAACAATTAGACAAACCTCACAAACGCCGATTATTATGCTGACG
GCTAAGGGTGAAGACATGACTAAAATACTAGGGCTAGAGTATGGCGCTGATGATTACATGACAAAACCCTTTAATATTTT
AGAACTAAAAGCAAGAATAAAAGCAGTTCTAAGGAGAGCACAAAGCAAAGAAGGAAATGTGGGAGAACGTGTGATTCATA
TTGATGACTTTAAAATCAATACAATGGGCAGAAAAGTAAGCATACATGGGGAAGAAGTCAATTTGACCGCCAAGGAGTTT
GATCTATTACTACTCTTAGCATCAAATCATGGTAAGGTCTATAGTAGGGAGGCGCTATTGGAAATCATATGGGGATATGA
ATATTTTGGAGACCTGAGAACAGTAGATGTACATGTGAGAAGATTAAGAGAAAAGGTAGAATCAAACTCTAGCCAACCAA
AGTATATCTTAACTAAATGGGGGGTAGGCTATTATTTTAGAACCAAATAA

Protein sequence :
MVYKLLVVDDEPLLVKGLRYSLEQDGYEILSASDGEEALDKFNKGSFDLIILDLMLPKIDGLEVCQTIRQTSQTPIIMLT
AKGEDMTKILGLEYGADDYMTKPFNILELKARIKAVLRRAQSKEGNVGERVIHIDDFKINTMGRKVSIHGEEVNLTAKEF
DLLLLLASNHGKVYSREALLEIIWGYEYFGDLRTVDVHVRRLREKVESNSSQPKYILTKWGVGYYFRTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-44 44
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-44 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_012469.1.7685629. Protein 8e-57 52
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_002952.2859905.p0 Protein 2e-48 50
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_002745.1124361.p0 Protein 3e-48 50
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_009782.5559369.p0 Protein 3e-48 50
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_002951.3237708.p0 Protein 3e-48 50
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_007622.3794472.p0 Protein 2e-48 50
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_002758.1121668.p0 Protein 3e-48 50
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_009641.5332272.p0 Protein 3e-48 50
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_013450.8614421.p0 Protein 3e-48 50
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_007793.3914279.p0 Protein 3e-48 50
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_003923.1003749.p0 Protein 2e-48 50
Amet_2325 YP_001320141.1 two component transcriptional regulator HE999704.1.gene2815. Protein 4e-49 49
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_010079.5776364.p0 Protein 6e-42 45
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_002952.2859858.p0 Protein 6e-42 45
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_007622.3794948.p0 Protein 6e-42 45
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_003923.1003417.p0 Protein 6e-42 45
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_013450.8614146.p0 Protein 6e-42 45
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_002951.3238224.p0 Protein 6e-42 45
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_007793.3914065.p0 Protein 6e-42 45
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_002758.1121390.p0 Protein 6e-42 45
Amet_2325 YP_001320141.1 two component transcriptional regulator AE015929.1.gene1106. Protein 1e-36 44
Amet_2325 YP_001320141.1 two component transcriptional regulator AF130997.1.orf0.gene Protein 3e-36 44
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_014475.1.orf0.gen Protein 6e-39 44
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_005054.2598277.p0 Protein 6e-39 44
Amet_2325 YP_001320141.1 two component transcriptional regulator CP000034.1.gene3671. Protein 2e-41 44
Amet_2325 YP_001320141.1 two component transcriptional regulator FJ349556.1.orf0.gene Protein 5e-41 43
Amet_2325 YP_001320141.1 two component transcriptional regulator AF155139.2.orf0.gene Protein 8e-42 43
Amet_2325 YP_001320141.1 two component transcriptional regulator AF162694.1.orf4.gene Protein 3e-35 43
Amet_2325 YP_001320141.1 two component transcriptional regulator AM180355.1.gene1830. Protein 4e-40 43
Amet_2325 YP_001320141.1 two component transcriptional regulator DQ212986.1.gene4.p01 Protein 2e-38 43
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_012469.1.7686381. Protein 1e-40 42
Amet_2325 YP_001320141.1 two component transcriptional regulator EU250284.1.orf4.gene Protein 5e-36 42
Amet_2325 YP_001320141.1 two component transcriptional regulator AE000516.2.gene3505. Protein 7e-41 42
Amet_2325 YP_001320141.1 two component transcriptional regulator CP001138.1.gene4273. Protein 3e-29 41
Amet_2325 YP_001320141.1 two component transcriptional regulator NC_002695.1.915041.p Protein 2e-28 41
Amet_2325 YP_001320141.1 two component transcriptional regulator CP004022.1.gene3215. Protein 6e-33 41
Amet_2325 YP_001320141.1 two component transcriptional regulator CP000034.1.gene3834. Protein 2e-28 41
Amet_2325 YP_001320141.1 two component transcriptional regulator CP001918.1.gene5135. Protein 6e-26 41
Amet_2325 YP_001320141.1 two component transcriptional regulator BAC0125 Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amet_2325 YP_001320141.1 two component transcriptional regulator VFG1702 Protein 6e-45 44
Amet_2325 YP_001320141.1 two component transcriptional regulator VFG1563 Protein 2e-44 43