Gene Information

Name : Amet_2257 (Amet_2257)
Accession : YP_001320074.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2332155 - 2332349 bp
Length : 195 bp
Strand : -
Note : PFAM: helix-turn-helix domain protein; KEGG: swo:Swol_2033 hypothetical protein

DNA sequence :
ATGAAAAATAAATTAAAAACCCTACGCAAGGAATTAGGATTACGTCAAGAAGATGTTGCAAATCAACTGGGTGTGACAAG
ACAAACCATTATAGCTATCGAGAATGATAAATACAATCCCACTCTTGAATTAGCAATGAAACTTGCAAGATTTCTGGACA
CCACTGTTGAAGAATTATTTCAACTAGAAAATTAG

Protein sequence :
MKNKLKTLRKELGLRQEDVANQLGVTRQTIIAIENDKYNPTLELAMKLARFLDTTVEELFQLEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-11 57
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-09 48
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-09 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amet_2257 YP_001320074.1 XRE family transcriptional regulator VFG2168 Protein 6e-10 48
Amet_2257 YP_001320074.1 XRE family transcriptional regulator VFG2175 Protein 6e-10 48