Gene Information

Name : Amet_0201 (Amet_0201)
Accession : YP_001318095.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 234714 - 235337 bp
Length : 624 bp
Strand : +
Note : PFAM: sugar transferase; KEGG: bha:BH3716 galactosyltransferase

DNA sequence : 
ATGGTTTACTTAAAAATCAAAAGATTAATAGATATCATACTTTCATCACTAGGACTTATCATATTATCTCCTGTTTTTTT
AGTACTTATTTTAGCAATCAAGGTTGACTCCCCTGGACCTGTTCTCTTTAAACAGAAGAGAGTGGGGATCCATAAGAGTC
ATTTTAATATATTGAAGTTTAGAACCATGAGAATTGACACGCCAAAGGACACCCCAACACATCTTTTAGATAATCCGGAT
CAGTGGATTACTAAGGTGGGTAAGTTCCTACGCAGAACATCTCTGGACGAGCTACCACAAATCATCAACATTTTTAAAGG
TGAAATGAGTATTATTGGTCCTAGGCCTGCGCTTTGGAATCAGTATGATCTGATTGAAGAAAGAGATAAGTACGGTGCGA
ATGACGTTCCTGTTGGCCTCACGGGCTGGGCGCAGATTAATGGTAGAGATGAACTTGAGATTGATGTTAAGGCGAAACTT
GATGGAGAATACGCTGAGAAGATTGGTTTCATGATGGATGTCAGATGCTTCTTTGGGACGGTGATAAGCGTACTGAGGAC
TGATGGAGTTGTTGAAGGTGGGACTGGGACGAAAAAAGCTGATAAAGAGTCAGTTAGACAATAA

Protein sequence : 
MVYLKIKRLIDIILSSLGLIILSPVFLVLILAIKVDSPGPVLFKQKRVGIHKSHFNILKFRTMRIDTPKDTPTHLLDNPD
QWITKVGKFLRRTSLDELPQIINIFKGEMSIIGPRPALWNQYDLIEERDKYGANDVPVGLTGWAQINGRDELEIDVKAKL
DGEYAEKIGFMMDVRCFFGTVISVLRTDGVVEGGTGTKKADKESVRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 3e-34 47
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 7e-34 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amet_0201 YP_001318095.1 sugar transferase VFG1369 Protein 5e-49 62
Amet_0201 YP_001318095.1 sugar transferase VFG1309 Protein 3e-35 48