Gene Information

Name : Amet_2082 (Amet_2082)
Accession : YP_001319901.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2166353 - 2166547 bp
Length : 195 bp
Strand : +
Note : PFAM: helix-turn-helix domain protein; KEGG: btl:BALH_0634 transcriptional regulator

DNA sequence :
ATGGCTGTAAGTAGAATGAAAGTAGCTCGAGTGGAAAAAGATTTTACCCAGGAAGATTTAGCTAATATTGTGGGTGTTAC
TAGGCAAACCATTAGTCTTATTGAAGGAGGAAAGTATAATCCTTCAATAAAACTATGTATTGAAATAGCCAAGGCCTTGA
ATAAGACCTTAAATGATTTGTTTTGGGAAACATAA

Protein sequence :
MAVSRMKVARVEKDFTQEDLANIVGVTRQTISLIEGGKYNPSIKLCIEIAKALNKTLNDLFWET

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 4e-08 42
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-08 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amet_2082 YP_001319901.1 XRE family transcriptional regulator VFG2175 Protein 1e-08 42
Amet_2082 YP_001319901.1 XRE family transcriptional regulator VFG2168 Protein 1e-08 42