|
Name : Amet_1903 (Amet_1903) Accession : YP_001319726.1 Strain : Alkaliphilus metalliredigens QYMF Genome accession: NC_009633 Putative virulence/resistance : Resistance Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG0488 EC number : - Position : 1997432 - 1998895 bp Length : 1464 bp Strand : + Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spa:M6_Spy1165 macrolide-specific ABC-type efflux carrier DNA sequence : ATGACATTATTAATAAAAGCAAAAGACATTTGTGTAGAATATTTAGGACGTGATATTTTAGAGATTGATGAATTAGAATT ATATAGTTATGACAGAATTGGTTTAGTAGGAGCAAATGGAGCAGGAAAAAGTACATTACTCAAAGTGCTTTTAGGAGAAT TAACACCCTCAGGAAGTAAAATCAAACGCTTAGGAAAATTTGCCTATATTTCCCAATTGGATGAAGCAACTTTGCAGAAG CCCAAGGATTTTGCATTGATGGGTAAAATGGGTGTTGATGAATTAGATGTAGAGAAAATGAGTGGAGGTGAAGAAACAAG ACTTAAAATAGCTCAGGCCCTTTCGGAACAAGTCCATGGTATTTTTGCAGATGAACCTACCAGTCATTTAGACCGTGAAG GAATTGATTTTTTAATTGGACAGTTAAAGTATTTTCCAGGTACATTGCTAGTGATTAGCCATGACCGTTATTTTTTAGAT GAGGTAGTCGATAAGATATGGGAGCTGAAAGATGGAAAGATTACGGAGTATTGGGGGAACTATTCCGATTATCTTCATCA AAAAGAGGAAGAACGTAAGGTTCAGGCTACAAAGCACGAAAAATTTGTTGCGGAACGTGAACGATTAGAGAAGTCTGCTG AGGAGAAGCGAAAGCAGGCACAAAAAATAGTTCGGAAAGCCAAAGGTGCTGCTAGAAAAAACAGTTCTGAAAGTGGTGGA CGTCTGGGACATCAGAAAACTATTGGAAGTAAGCAAAAGAAGATGCACAATGCCGCTAAATCAATTGAACATAAGATTGA AGCCCTTGGAGATGTGGAAGCGCCGGAAAATAGTCAAAGGATTTATTTTCGTCAGAGTGCAGCACTGGAACTTCATAATC CCTATCCGATTATTGTAACTGAAATGACGAAACGATTTGGTGATAAAGTGTTATTTGAAGATGCTTCTTTTAATATTCCA CTTGGGGCTAAAGTAGCGTTAACTGGTGGCAATGGAACAGGAAAAACAACCTTAATTAAAATGATTTTAAACCGTGAAGA GGGCATTGATATTTCCCCTAAGGCTGAAATCGGATACTTTGCTCAAAATGCTTATAAGTATAATCTTAATCAAAATGTAA TGGAATTTATGCAGGAGAGCTGCGATTATAACGTATCTGAAATTCGCTCAGTGTTGGCGTCAATGGGCTTTAAACAGAAT GATATCAGCAAAAAAATAGCTGTTCTAAGCGGAGGTGAAATGATTAAATTGAAGCTAGCTCAACTGTTACTAGGTAAGTA TAATATTTTACTAATGGACGAACCAGGCAACTATTTGGATCTAATGAGCCTAGAGTCTTTAGAGATGTTGATGAAAAAAT ATGCTGGTACAATTATATTTATCAGCCATGATAAAAGGCTAGTTGATAATGTTGCTAATGTGGTTTATGAAATTAAGGAT CAAGAAATTGTGCAAATAAAATAG Protein sequence : MTLLIKAKDICVEYLGRDILEIDELELYSYDRIGLVGANGAGKSTLLKVLLGELTPSGSKIKRLGKFAYISQLDEATLQK PKDFALMGKMGVDELDVEKMSGGEETRLKIAQALSEQVHGIFADEPTSHLDREGIDFLIGQLKYFPGTLLVISHDRYFLD EVVDKIWELKDGKITEYWGNYSDYLHQKEEERKVQATKHEKFVAERERLEKSAEEKRKQAQKIVRKAKGAARKNSSESGG RLGHQKTIGSKQKKMHNAAKSIEHKIEALGDVEAPENSQRIYFRQSAALELHNPYPIIVTEMTKRFGDKVLFEDASFNIP LGAKVALTGGNGTGKTTLIKMILNREEGIDISPKAEIGYFAQNAYKYNLNQNVMEFMQESCDYNVSEIRSVLASMGFKQN DISKKIAVLSGGEMIKLKLAQLLLGKYNILLMDEPGNYLDLMSLESLEMLMKKYAGTIIFISHDKRLVDNVANVVYEIKD QEIVQIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| msr(E) | YP_005176244.1 | macrolide efflux protein | Not tested | ICEPmu1 | Protein | 5e-146 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Amet_1903 | YP_001319726.1 | ABC transporter-like protein | NC_012469.1.7685970. | Protein | 2e-172 | 77 |
