Gene Information

Name : Amet_1018 (Amet_1018)
Accession : YP_001318894.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : -
Position : 1065408 - 1066508 bp
Length : 1101 bp
Strand : +
Note : TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: cno:NT01CX_0715 riboflavin biosynthesis protein RibD

DNA sequence : 
GTGCACAACCAATATATGAGAAAAGCCATTGAATTAGCAAAAAAGGGGACTGGACACACAAATCCCAACCCATTGGTAGG
GGCAGTCATCGTAAAAAACAATAAAGTGATTGGTGAAGGCTACCATCATTATTATGGAGGCCCACATGCAGAGGTTGATG
CTTTTAACAATGCAACTGAAGATGTGAAGGGGGCAACGATGTATGTCACCCTAGAACCATGCTCCCATTATGGGAAAACA
CCACCCTGTGCAAAAGCCATTGTAGAGAAGGGGATTGCCCAAGTGGTAATTGCCATGAGAGATCCTAATCCACTGGTGGC
GGGAAATGGGATTGGGATTTTGAGAGAAAGTGGAATTGAAGTCATATCAGAAGTTTTGGAGTCTGAAGCAAAAAATCTAA
ACGAAATTTTTGTGAAATATATCACCACTGAAATGCCCTTTTGTATTTTAAAAACCGCCATGACATTAGATGGCAAGATT
GCCACTGCCACAGGAGATTCTAAATGGATCACCAATGAGGAGTCAAGACAATATGTTCATGAGATCAGACACCAGGTATC
TAGTATCATGGTAGGCATCGGTACAGTTTTAGTAGATGATCCACAATTAACAACCCGATTGCACAATCAAGAAGGCTCAG
ACCCCATTCGAGTGATTGTAGATACTGAGGCTAAAACGCCACTATGGGCTCAGGTGTTACAGCTTTCTTCGAAGGTGAGA
ACAATTATTGCAACAACTGAAAAGGCTGACCCTAATAAAATAAAAGCCCTGGAAGAAAAGGGTGCTGAAGTCATCATAAT
CCCTCTTAAAAATAATCAAGTGGATTTGAAGTGTTTGATTCAACAGCTAGGGGCTAAAGGAATAGATAGTGTCTTGATTG
AAGGGGGAGCCACTTTAAATGACAGTGCATTGCAGGAAGGAATCGTAGACAAGGTTGTTTCCTTTATTGCACCTAAGATA
GTAGGTGGCGCCAAGGCCAAAACCCCAGTAGGGGGAGACGGAATTAAATATATGAAGGATGCAATTCAGTTAACAGATAT
TCAAGTAAGAAAATTTGGCCAGGATATTATGATTGAAGGATACTTAGGAAAGGGAGAATAG

Protein sequence : 
MHNQYMRKAIELAKKGTGHTNPNPLVGAVIVKNNKVIGEGYHHYYGGPHAEVDAFNNATEDVKGATMYVTLEPCSHYGKT
PPCAKAIVEKGIAQVVIAMRDPNPLVAGNGIGILRESGIEVISEVLESEAKNLNEIFVKYITTEMPFCILKTAMTLDGKI
ATATGDSKWITNEESRQYVHEIRHQVSSIMVGIGTVLVDDPQLTTRLHNQEGSDPIRVIVDTEAKTPLWAQVLQLSSKVR
TIIATTEKADPNKIKALEEKGAEVIIIPLKNNQVDLKCLIQQLGAKGIDSVLIEGGATLNDSALQEGIVDKVVSFIAPKI
VGGAKAKTPVGGDGIKYMKDAIQLTDIQVRKFGQDIMIEGYLGKGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-50 44
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-50 44