Gene Information

Name : Amet_0983 (Amet_0983)
Accession : YP_001318859.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Resistance
Product : protein tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 1027357 - 1027758 bp
Length : 402 bp
Strand : +
Note : PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: cth:Cthe_1110 protein tyrosine phosphatase

DNA sequence :
ATGAAAAAAAAGGTAGCATTTGTATGTGTTCACAATTCTTGTCGTTCACAAATGGCAGAGGGGTGGGCGAAAAAGTTAGG
CAGTCATGTACTGGAAGTATACTCAGCTGGAACAGAAGACTATCCAGAAGTAAAGCCTGGGGCAGTTCAAGTAATGGAGG
AAGCAGGAGTCGATATGAGTGAACACAGTCCTAAGCTATTAACTGATATTCCAGAAGAAGTTGATTATCTGATTACCATG
GGATGCAATGTCGTGTGCCCCTTTGTACCATGCAGTCACAGTGAAGATTGGGGACTTGAGGATCCCTCTGGTGGACCAAC
GGAAGGTTTTAGAAATACAAGGGATCTGATTAAGGCAAAGGTAGAGGACTTCATCAAAAGAGTAGAAAATAACGAAATAT
AA

Protein sequence :
MKKKVAFVCVHNSCRSQMAEGWAKKLGSHVLEVYSAGTEDYPEVKPGAVQVMEEAGVDMSEHSPKLLTDIPEEVDYLITM
GCNVVCPFVPCSHSEDWGLEDPSGGPTEGFRNTRDLIKAKVEDFIKRVENNEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 4e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amet_0983 YP_001318859.1 protein tyrosine phosphatase BAC0586 Protein 3e-16 43