Gene Information

Name : Amet_0981 (Amet_0981)
Accession : YP_001318857.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Resistance
Product : regulatory protein ArsR
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 1026674 - 1026991 bp
Length : 318 bp
Strand : +
Note : PFAM: regulatory protein, ArsR; KEGG: lin:pli0036 similar to arsenical resistance operon repressor

DNA sequence :
ATGGACGATCAAGTAGAAATACTAAAAGCTTTGGCAGATAAAAATAGACTGCTCATTATAGAGATGCTTTCCTGTGGGGA
GCTGTGTGCCTGCGATATTATGGATGGACTAGCGTTAACACAGCCAACAATTTCACATCACATGAAGATTCTACAGCATG
CTAAGCTTGTGAAGAGAAGAAAGGAAGGGAAATGGGTATTTTATTCGATTAATCAAGAAAAAGTCGATGAACTCCAGGGC
TTTCTTAAACACCTAACGTCATTTAAAGAAGACTGTGTTTGTAAAGGAGCTACTCAAGAAAGCTGTTATTGTAGATAA

Protein sequence :
MDDQVEILKALADKNRLLIIEMLSCGELCACDIMDGLALTQPTISHHMKILQHAKLVKRRKEGKWVFYSINQEKVDELQG
FLKHLTSFKEDCVCKGATQESCYCR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsR YP_005754066.1 arsenical resistance operon repressor Not tested Type-XI SCCmec Protein 7e-18 45
arsR YP_252018.1 arsenical resistance operon repressor Not tested SCCmec Protein 1e-16 44
arsR YP_252025.1 arsenical resistance operon repressor Not tested SCCmec Protein 3e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amet_0981 YP_001318857.1 regulatory protein ArsR BAC0590 Protein 2e-17 43
Amet_0981 YP_001318857.1 regulatory protein ArsR BAC0592 Protein 1e-16 43