Gene Information

Name : SaurJH1_0468 (SaurJH1_0468)
Accession : YP_001315614.1
Strain : Staphylococcus aureus JH1
Genome accession: NC_009632
Putative virulence/resistance : Virulence
Product : superantigen-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 489474 - 490157 bp
Length : 684 bp
Strand : +
Note : these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation

DNA sequence : 
ATGAAATTAAAAAATATTGCTAAAGCAAGTTTAGCACTAGGGATTTTAACAACAGGTATGATTACAACTACTGCTCAGCC
AGTAAAAGCAAGTACATTAGAGGTTAGATCACAAGCTACTCAAGACTTGAGTGAATATTATAAAGGGAGAGGATTTGAAT
TAACAAATGTAACAGGATATAAATACGGAAATAAAGTTACATTTATAGATAATTCTCAACAAATTGATGTTACATTGACA
GGAAATGAAAAATTAACTGTTAAAGATGATGACGAAGTTTCTAATGTTGACGTGTTTGTAGTAAGAGAAGGTAGTGACAA
ATCAGCTATCACAACATCGATTGGTGGAATTACAAAGACAAATGGGACTCAACATAAAGATACTGTTCAAAACGTTAATT
TGTCAGTTTCTAAGAGTACAGGTCAACACACTACTTCTGTGACTTCAGAATACTATAGCATCTATAAAGAAGAAATCTCA
TTAAAAGAACTTGATTTTAAATTAAGAAAGCATTTAATTGATAAACATGATCTTTATAAGACAGAACCTAAAGACAGTAA
AATTAGAATTACTATGAAAAACGGTGGCTATTATACATTTGAATTAAATAAAAAATTACAGCCTCATCGCATGGGTGATA
CGATTGATAGTAGAAATATAGAGAAAATTGAAGTGAATTTATAA

Protein sequence : 
MKLKNIAKASLALGILTTGMITTTAQPVKASTLEVRSQATQDLSEYYKGRGFELTNVTGYKYGNKVTFIDNSQQIDVTLT
GNEKLTVKDDDEVSNVDVFVVREGSDKSAITTSIGGITKTNGTQHKDTVQNVNLSVSKSTGQHTTSVTSEYYSIYKEEIS
LKELDFKLRKHLIDKHDLYKTEPKDSKIRITMKNGGYYTFELNKKLQPHRMGDTIDSRNIEKIEVNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
set15 NP_370957.1 superantigen-like protein Virulence vSa¥á Protein 3e-94 100
set15 NP_373644.1 superantigen-like protein Virulence vSa¥á Protein 3e-94 100
SAUSA300_0407 YP_493121.1 superantigen-like protein Virulence vSa¥á Protein 1e-61 75
SACOL0478 YP_185368.1 superantigen-like protein Virulence vSa¥á Protein 1e-61 75
set11nm YP_001331434.1 superantigen-like protein Virulence vSa¥á Protein 1e-61 75
SAKOR_00417 YP_008490601.1 Exotoxin Not tested vSa¥á Protein 1e-64 74
SAS0396 YP_042522.1 superantigen-like protein Virulence vSa¥á Protein 5e-65 74
set26 NP_645211.1 superantigen-like protein Virulence vSa¥á Protein 5e-65 74
SAMSHR1132_03810 YP_005324902.1 exotoxin Virulence vSa¥á Protein 5e-59 70
SAR0435 YP_039886.1 superantigen-like protein Virulence vSa¥á Protein 5e-58 67
set3 YP_039879.1 superantigen-like protein 5 Virulence vSa¥á Protein 3e-36 49
SAS0384 YP_042509.1 superantigen-like protein Virulence vSa¥á Protein 7e-36 48
set16 NP_645199.1 superantigen-like protein Virulence vSa¥á Protein 7e-36 48
set10 NP_370949.1 superantigen-like protein 5 Virulence vSa¥á Protein 4e-36 48
set10 NP_373636.1 superantigen-like protein 5 Virulence vSa¥á Protein 4e-36 48
SAKOR_00409 YP_008490593.1 Exotoxin Virulence vSa¥á Protein 2e-36 48
SAS0388 YP_042513.1 superantigen-like protein 5 Virulence vSa¥á Protein 3e-36 47
set5nm YP_001331426.1 superantigen-like protein 5 Virulence vSa¥á Protein 9e-36 47
set20 NP_645203.1 superantigen-like protein 5 Virulence vSa¥á Protein 3e-36 47
SAUSA300_0399 YP_493113.1 superantigen-like protein 5 Virulence vSa¥á Protein 9e-36 47
set6 NP_370946.1 superantigen-like protein Virulence vSa¥á Protein 5e-36 46
set6 NP_373632.1 superantigen-like protein Virulence vSa¥á Protein 5e-36 46
SAR0422 YP_039874.1 superantigen-like protein Virulence vSa¥á Protein 2e-34 46
SAMSHR1132_03750 YP_005324897.1 exotoxin 3 Virulence vSa¥á Protein 1e-32 46
set4 YP_039882.1 superantigen-like protein Virulence vSa¥á Protein 1e-27 44
SAKOR_00404 YP_008490588.1 Exotoxin Virulence vSa¥á Protein 8e-34 44
SAMSHR1132_03720 YP_005324894.1 exotoxin Virulence vSa¥á Protein 2e-33 43
set7nm YP_001331428.1 superantigen-like protein 7 Virulence vSa¥á Protein 1e-26 43
SAUSA300_0401 YP_493115.1 superantigen-like protein 7 Virulence vSa¥á Protein 1e-26 43
SACOL0468 YP_185358.1 superantigen-like protein Virulence vSa¥á Protein 2e-32 42
set1nm YP_001331422.1 superantigen-like protein Virulence vSa¥á Protein 2e-32 42
SAUSA300_0395 YP_493109.1 superantigen-like protein Virulence vSa¥á Protein 2e-32 42
set25 NP_645208.1 superantigen-like protein Virulence vSa¥á Protein 3e-28 42
SAS0393 YP_042518.1 superantigen-like protein Virulence vSa¥á Protein 3e-28 42
SAS0389 YP_042514.1 superantigen-like protein Virulence vSa¥á Protein 5e-27 42
set21 NP_645204.1 superantigen-like protein Virulence vSa¥á Protein 5e-27 42
SAKOR_00413 YP_008490597.1 Exotoxin Virulence vSa¥á Protein 3e-28 42
SAKOR_00410 YP_008490594.1 Exotoxin Virulence vSa¥á Protein 3e-26 41
set13 NP_370952.1 superantigen-like protein Virulence vSa¥á Protein 9e-22 41
set13 NP_373639.1 superantigen-like protein Virulence vSa¥á Protein 9e-22 41
set11 NP_370950.1 superantigen-like protein 7 Virulence vSa¥á Protein 6e-22 41
set11 NP_373637.1 superantigen-like protein 7 Virulence vSa¥á Protein 6e-22 41
SAMSHR1132_03770 YP_005324899.1 exotoxin 4 Virulence vSa¥á Protein 4e-25 41
set9 NP_373635.1 superantigen-like protein Virulence vSa¥á Protein 5e-24 41