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Name : Smed_6519 (Smed_6519) Accession : YP_001315000.1 Strain : Genome accession: NC_009622 Putative virulence/resistance : Unknown Product : integrase catalytic region Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 208309 - 209808 bp Length : 1500 bp Strand : - Note : PFAM: Integrase catalytic region; KEGG: nha:Nham_3923 integrase, catalytic region DNA sequence : ATGCTTGTTGTGGAGACGATTGCGAAGATACGCCGCCTTGCGCTTGTGCAGGGCAAGTCGATCAAGGCGATCTGCCGTGA ACTCGGCATATCGCGGAAAGTGGTGCGGAAGGTTCTGCGCACCGATGAGACGGAGTTCAAATACGAGCGGACCCGCCAGC CACAGCCGAAGCTCGGCCCGTGGCGGGATAAGCTCGATCAACTGCTGCTGAACAATGAAGCCAAAGCTTCACGCGAGCGA CTGACGCTGATCCGGATATTCGAGGATTTGCGCGATCTGGGCTACGAGGGCGGTTACGATACCGTCCGACGCTATGCCCG GACGTGGGCGAAGGAGCGCGGGGCCGTGACGGCGCAAGCCTATGTGCCGCTCTATTACGCGCCGGGCGAGGCCTACCAGT TTGACTGGAGCCACGAGATTATCGTGCTGAACGGCGTGACGACGACGGTGAAGGTAGCCCATGTCCGGCTCTGCCACAGC CGGATGATGTATGTGCGGGCCTACCCGCGCGAGACGCAGGAGATGGTGTTCGACGCCCATGACCGGGCGTTCGCCTTCTT CGGCGGGGCCTGCACGCGCGGCATCTACGACAACATGAAGACCGCGGTGGAGACGGTCTTTGTCGGCAAGGAGCGGCAAT ATAATCGCCGCTTTCTGCAGATGTGCAGCCATTACCTGATCGAGCCAGTGGCCTGCACGCCGGCGTCAGGATGGGAGAAA GGACAGGTCGAGAACCAGGTCAATCTGGTGCGGGAACGCTTCTTCACGCCGCGACTGCGCTTCAAATCCTACGATGAGCT GAATGGCTGGCTGCTGGACAAGTGCATCAGCTACGCCCGCGCCCATAAGCATGTCGATCAGCCGGAGCGCACGATCTGGG AGGTGTTCGAAACAGAGAAACCCCACCTGGTCAGCTATCCCGGCAAGTTCGATGGTTTCCATGCCGTGCAGGCCTCGATC GGCAAGACCTGCCTCGTGCGTTTCGACAACAACAAATACTCGGTGCTGTCGACCGCGGTCGGCCGCCCGGCCGAGATACA TGCCTATGCCGATCGCATCGTCATCCGGCAAGATGGCGTCGAGATCGGCCAGCACGACCGCTGCTTCGGCCGTGGCGAGA CGATCTATAATCCATGGCATTACGTGCCGGTCCTGACCCGCAAGCCGGGAGCGCTGCGCAACGGCGCGCCGTTCCACGAC TGGGTTTTGCCTGCCGCCATGGAGAAAGTGCGCCGCCGGCTGAAGGCCATGCATGACGGTGACCGCCAGATGGTGTCAAT CCTCGAATGCGTCGGCCTGGACGGGCTCCCCGCCGTCGAGGCGGCCTGCCAGGAGGCGCTCGATCAGGGCGTATTCTCGG CGGCCGTCATCATCAACATCCTGGCCCGCAACCGTGACCCGCAGCCGGCCGCCATCCTTTCCATTCCCGATGCGCTTCGC CTGACCTATGAGCCTCTGGCCGATTGCGCCCGTTACGACAGCCTCAGGAGGGCAAGCTGA Protein sequence : MLVVETIAKIRRLALVQGKSIKAICRELGISRKVVRKVLRTDETEFKYERTRQPQPKLGPWRDKLDQLLLNNEAKASRER LTLIRIFEDLRDLGYEGGYDTVRRYARTWAKERGAVTAQAYVPLYYAPGEAYQFDWSHEIIVLNGVTTTVKVAHVRLCHS RMMYVRAYPRETQEMVFDAHDRAFAFFGGACTRGIYDNMKTAVETVFVGKERQYNRRFLQMCSHYLIEPVACTPASGWEK GQVENQVNLVRERFFTPRLRFKSYDELNGWLLDKCISYARAHKHVDQPERTIWEVFETEKPHLVSYPGKFDGFHAVQASI GKTCLVRFDNNKYSVLSTAVGRPAEIHAYADRIVIRQDGVEIGQHDRCFGRGETIYNPWHYVPVLTRKPGALRNGAPFHD WVLPAAMEKVRRRLKAMHDGDRQMVSILECVGLDGLPAVEAACQEALDQGVFSAAVIINILARNRDPQPAAILSIPDALR LTYEPLADCARYDSLRRAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 8e-113 | 49 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 6e-81 | 42 |
