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Name : Smed_6486 (Smed_6486) Accession : YP_001314974.1 Strain : Genome accession: NC_009622 Putative virulence/resistance : Unknown Product : transposase IS66 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 178952 - 180520 bp Length : 1569 bp Strand : - Note : PFAM: transposase IS66; KEGG: ret:RHE_PA00098 probable insertion sequence transposase protein, IS66 family DNA sequence : GTGGCATGGAAACAACGCCGCTGCACACTCAGGACGAGCTATCTGCTTTGCGCGCGCTCGTCGCTGAACAGGCGGCGAAA CTCAGCGCAAGAAGCCGAAGTCAGCAAGCGCGACTCCATTATCGGCCTTCTGCGCGCGCAGTTGGAACTGCTGCGCCATC GACAACATGGCCCTTCTTCGGAAAAGATAGACCGCAAAATCGAGCAATTCGAGCTGATGCTGGAGGAGATCGAGGCTTCT CGCGCTGAGGCCGATGCGCGCTCTGCGAACTCCCCCTTGCCGGAGTTAGACGACGAACCGGACAAGCCGAAGCGCAGACC GCTGCCGGATGGCCTTCCAACTGAGGAGCTGGTCTACGCGGCACCCTGCAATTGTCCGACTTGTGGTGGCACATCTTTCC TGAAGGCGGCTGACAAGGTGGTCCAGGTGATGGAGCACGTACCGGCGTCCGTAAAGATTGTCCGCCATATCGAAAAGCGC ATGGTCTGCAAGGACTGCGATACGACGGTGTCTGGCGAAATGCCGACCTTGCCGATCGGGCGAGGCAAGCCCGGTCCGGG GTTGCTCGCGCATATCATGGTCGCCAAGTTCGACGATCACATCCCGCTCTACCGTCTCTCCGAGATGTACGACCGCCTGG GGATAGACATCTCCCGGTCTGTCATGGCGGACTGGGTTGGCCGTGTGTCCGTTCTGCTTTCGCCCCTCATCTTGCTGATC AGAGCCCATATCGCCGCGGTCGACCGAATACACACGGACGATACCCCGGTTGATGTTCTCGACCCTGGACGGGGCAAAAC GAAAACCGGCAGAGTCTGGGTCTATGTCTTCGATGGCAGCGGGTATCAAGATCCCACTCCCAGAGCTGTCGCCTATTACT ATAGCCCCGACCGCAAGGGCGCGCATCCGGCAGACCACCTCGCTGACTTCAGCGGCGTGATGCATGCCGATGGCTACGGT GGCTATAAGAAGCTTTACGGCAACCAGATCGTTGAGGCCGCGTGCATGGCGCACGTGCGCCGCAAGTTCCATGACGTAAT CAAGCTGAAGCCATCACCGATAGCCGAGGAGGCGCTGTCTCGCATCGGCGCGCTCTACGATATCGAGGATCGGATCCGCG GCATGCCGGCCGCCGAGCGCCAAATGCTGCGACAAGAGCACGCTGGTCCCATTCTGAGAGACCTGAAGTTCTGGATCGAG GAAACGCTTCCGACTTTGCCGCAGAAACAGAAGTTGGCCGAGGCGATGCGATATGCCCTCTCGCGGTGGGCGGCATTGAG CGTTTACATCGACGATGGGCGCGTCGAGATCGACAACAATATAGCTGAACGAGCCATGCGCCCGCTTGGAATTGGTCGAA AGAACTGGCTCTTCGCCGGCTCCGACAAGGGCGGCGAGCGCATCGCGGATATCCTGACTATCATCGAGACGGCCAAACAA CATGGCCTCAATCCGGAGGTCTATCTGACAGACGTCCTAACCCGGATCCAAGATCATCCCACGGATCGCCTTGAGGAACT GCTGCCGTGGCAGTGGGCGCCGGCAAAAGACCTGCACGAGGCTGCCTGA Protein sequence : MAWKQRRCTLRTSYLLCARSSLNRRRNSAQEAEVSKRDSIIGLLRAQLELLRHRQHGPSSEKIDRKIEQFELMLEEIEAS RAEADARSANSPLPELDDEPDKPKRRPLPDGLPTEELVYAAPCNCPTCGGTSFLKAADKVVQVMEHVPASVKIVRHIEKR MVCKDCDTTVSGEMPTLPIGRGKPGPGLLAHIMVAKFDDHIPLYRLSEMYDRLGIDISRSVMADWVGRVSVLLSPLILLI RAHIAAVDRIHTDDTPVDVLDPGRGKTKTGRVWVYVFDGSGYQDPTPRAVAYYYSPDRKGAHPADHLADFSGVMHADGYG GYKKLYGNQIVEAACMAHVRRKFHDVIKLKPSPIAEEALSRIGALYDIEDRIRGMPAAERQMLRQEHAGPILRDLKFWIE ETLPTLPQKQKLAEAMRYALSRWAALSVYIDDGRVEIDNNIAERAMRPLGIGRKNWLFAGSDKGGERIADILTIIETAKQ HGLNPEVYLTDVLTRIQDHPTDRLEELLPWQWAPAKDLHEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| c3563 | NP_755438.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 3e-80 | 49 |
| BCAM0248 | YP_002232880.1 | putative transposase | Not tested | BcenGI11 | Protein | 3e-97 | 48 |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | Protein | 1e-88 | 48 |
| aec53 | AAW51736.1 | Aec53 | Not tested | AGI-3 | Protein | 2e-82 | 46 |
| unnamed | CAC39285.1 | hypothetical protein | Not tested | LPA | Protein | 3e-93 | 45 |
| ECs4547 | NP_312574.1 | hypothetical protein | Not tested | LEE | Protein | 2e-93 | 45 |
| tnp | AEA34686.1 | transposase | Not tested | Not named | Protein | 2e-93 | 45 |
| unnamed | ACU09439.1 | IS66 family element transposase | Not tested | LEE | Protein | 1e-93 | 45 |
| Z4337 | NP_289562.1 | hypothetical protein | Not tested | OI-122 | Protein | 5e-93 | 45 |
| unnamed | AAC31494.1 | L0015 | Not tested | LEE | Protein | 3e-93 | 45 |
| Z5098 | NP_290249.1 | prophage-associated protein | Not tested | LEE | Protein | 5e-93 | 45 |
| unnamed | CAI43806.1 | hypothetical protein | Not tested | LEE | Protein | 1e-92 | 45 |
| unnamed | AAL57570.1 | unknown | Not tested | LEE | Protein | 4e-93 | 45 |
| Z1131 | NP_286666.1 | hypothetical protein | Not tested | TAI | Protein | 3e-92 | 44 |
| Z1570 | NP_287074.1 | hypothetical protein | Not tested | TAI | Protein | 3e-92 | 44 |
| Z4340 | NP_289564.1 | hypothetical protein | Not tested | OI-122 | Protein | 7e-85 | 44 |
| Z1161 | NP_286696.1 | hypothetical protein | Not tested | TAI | Protein | 5e-86 | 42 |
| Z1600 | NP_287104.1 | hypothetical protein | Not tested | TAI | Protein | 5e-86 | 42 |
| unnamed | AAL08460.1 | unknown | Not tested | SRL | Protein | 9e-66 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Smed_6486 | YP_001314974.1 | transposase IS66 | VFG1700 | Protein | 1e-80 | 49 |
| Smed_6486 | YP_001314974.1 | transposase IS66 | VFG0793 | Protein | 2e-93 | 45 |
| Smed_6486 | YP_001314974.1 | transposase IS66 | VFG1051 | Protein | 5e-66 | 42 |
| Smed_6486 | YP_001314974.1 | transposase IS66 | VFG1736 | Protein | 8e-69 | 41 |
