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Name : Smed_6340 (Smed_6340) Accession : YP_001314866.1 Strain : Genome accession: NC_009622 Putative virulence/resistance : Unknown Product : transposase IS66 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 7027 - 8619 bp Length : 1593 bp Strand : + Note : PFAM: transposase IS66; KEGG: nha:Nham_2793 transposase IS66 DNA sequence : ATGAATCGAACCGGCGAACCGAGCGTTGCAGAGCTGATGGCGCAGTTGGCGGCCAATGCTGCCGAAATCGCCGCGCTGAA AGCCGAGAAGGAAACGCTCTCGCAGCGGGTCGTCAAGCTGGAGGAAGAGCTGGCGCTTGCACGGCTGCATCGCTTTGCGC CGCGCAGCGAAAAGCACGTTGATCGCATCTTCAACGAAGCCGAAGAGGCTGCGGACGAGGATGGAGCGGACAGCCACGAG AGCGAGGTCATCGACATTCCGGACACAGGTCTGCCGCCTGTCGAAAGCACGACGGGTCAGAAGCGCGGCCGCAGACCACT ACCGCAGAACCTGCCGCGCGAGCGCGTCGAGTATGACCTTCCCGACGGTCAGAAGGCTTGTCCTTGCTGCCGTGGGCAGA TGCACCGCATGGGCGAGGCCGTTACCGAGCAACTTCATATCGAAGTGAAGGCGAAGGTCTTACAGAATGTGCGGTTCAAA TATGCATGCCGCCATTGCGATCGCACCGGGATCAACACGCCTGTCGTGACCGCGCCGATGCCGGTGCAGCCCTTGCCGGG CAGCATCGCCACGGCCTCGACACTGGCCTTCGCACTCGTTCACAAGTACGTCGACGGCACACCGCTCTACCGTCTGGCGC AGACCTTCGAACGCGCCGGTGTTCCTGTCAGCCGTGGTGCTCTCGGTCACTGGGTGATCGGTTCGAGCGAGAAGCATCTG CATCGCATCTATGACGCGCTGAAACTGCGGCTCAGGTCGCAATCCCTCATCCATGGCGACGAGACGACCGTTCAGGTCCT GAAGGAAAAGGGCAAAGAGGCCACCAGCACATCGTATATGTGGGCCTATCGGAGCGGCGACGACAGTGACGAGCCGATCG TGCTTCTCGATTATCAGCCGGGCCGCGGCCAGATTCACCCCCAGACCTTCCTCGGCGATTATCGCGGCATATTGATGAGC GATGGCTACACCGCCTGGCGCACGCTGGATGGCGCGATCCATATCGGATGCATGGCCCATTCGAGGCGACGCTTCGTCGA TGCCCTCAAAGCCAGAAAGAAAGGCGGCGGTCCGCCCGAGCAGGCGCTCCGGTTCTTCGAACAACTCTATCGGGTTGAAA GGCAAGCACGAGACAAGAAGCCTGATGCCGGCGAAACGAAGGCCGACAGCGTTCGCCGATTCCGACAGCAACACAGCATA CCCGTCCTGACCGCTCTCAAGGTATGGCTCGACGAAATCGCGCCGAAGGTTATGCCGGACACCAAGCTGGGCGATGCTGT CTCCTACACCCTGAACCAGTGGGATTATCTGACACGCTACAAAGACGATGGCAGGATGCCGATCGACAACAACATCTTGG AGCGCGACATCAGAGTTTTTGCGACCGGCAGAAAGAGTTGGCTGTTCAGCGATAGCACCGACGGAGCCAAGGCCAGCGCC GTCATCTACAGCCTCATGCTGACCTGCCGTGCCTGCGGCGTCGAGCCGTTGACGTGGTTGCGCCACGTCCTTACCGAATT GCCTCAACGCGCGGGCGATGCTGATATCGACGACCTGTTGCCCTTCGACCTCACACAGACTGCCACCGCCTGA Protein sequence : MNRTGEPSVAELMAQLAANAAEIAALKAEKETLSQRVVKLEEELALARLHRFAPRSEKHVDRIFNEAEEAADEDGADSHE SEVIDIPDTGLPPVESTTGQKRGRRPLPQNLPRERVEYDLPDGQKACPCCRGQMHRMGEAVTEQLHIEVKAKVLQNVRFK YACRHCDRTGINTPVVTAPMPVQPLPGSIATASTLAFALVHKYVDGTPLYRLAQTFERAGVPVSRGALGHWVIGSSEKHL HRIYDALKLRLRSQSLIHGDETTVQVLKEKGKEATSTSYMWAYRSGDDSDEPIVLLDYQPGRGQIHPQTFLGDYRGILMS DGYTAWRTLDGAIHIGCMAHSRRRFVDALKARKKGGGPPEQALRFFEQLYRVERQARDKKPDAGETKADSVRRFRQQHSI PVLTALKVWLDEIAPKVMPDTKLGDAVSYTLNQWDYLTRYKDDGRMPIDNNILERDIRVFATGRKSWLFSDSTDGAKASA VIYSLMLTCRACGVEPLTWLRHVLTELPQRAGDADIDDLLPFDLTQTATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAF71494.1 | unknown | Not tested | Hrp PAI | Protein | 5e-76 | 42 |
