Gene Information

Name : Smed_6020 (Smed_6020)
Accession : YP_001314619.1
Strain :
Genome accession: NC_009621
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 973891 - 974157 bp
Length : 267 bp
Strand : -
Note : PFAM: transposase IS3/IS911 family protein; KEGG: atc:AGR_L_545 hypothetical protein

DNA sequence :
ATGAAGCGATCGAAGTTTACGGAAGAGCAAATCATTTCGAACCTGCGCGAGCAGGAGGCAGGGGCAAAGACGGCGGAGCT
TTGCCGCAAGCATGGCATGTCGGAAGCGACCTTCTATGCCTGGAGGGCCAAGTTCGGCGGCATGGATGTTTCCGATGCGA
AGCGGCTGAAGGTCTTGGAGGAAGAGAATGCCAGGCTGAAGCGGCTTTTGGCGGAGGCGATGCTGGGTCAGGCGGCGTTG
AAGGACCTTTTGTCCCGAAAGTGGTGA

Protein sequence :
MKRSKFTEEQIISNLREQEAGAKTAELCRKHGMSEATFYAWRAKFGGMDVSDAKRLKVLEEENARLKRLLAEAMLGQAAL
KDLLSRKW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 2e-20 64
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 1e-20 64
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 1e-20 64
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 2e-20 63
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 2e-18 51
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 2e-18 51
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 6e-18 46