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Name : Smed_5892 (Smed_5892) Accession : YP_001314519.1 Strain : Genome accession: NC_009621 Putative virulence/resistance : Unknown Product : short-chain dehydrogenase/reductase SDR Function : - COG functional category : R : General function prediction only COG ID : COG4221 EC number : - Position : 857131 - 857853 bp Length : 723 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMa2343 putative oxidoreductase DNA sequence : ATGGACAAGGTCATTCTGATCACCGGCGCATCCAGTGGTATCGGCGAGGGCATCGCCCGGGAGCTTGGCGCAGCCGGAGC GAGATTATTGTTGGGTGCGCGCCGCCTGGACCGTATCGAGGCCATTGCCGAAGACATCAGGAGCGCAGGCGGAACCGCCA GGGCGCAGATACTGGACGTGACCGATCGTCAGTCGATGGCAGCCTTTGCGAAGAGCGCAGTTGAGACATGGGGCCGCATC GACGTTCTGGTGAACAATGCCGGCGTCATGCCGCTCTCGCCGCTTTCGGCCCTGAAGCTAGACGAATGGGAGCACATGGT CGACGTGAACATCAAGGGCGTGCTTTGGGGCATCGGCGCGGTGTTGCCGGTCATGACGGCACAGCATAGCGGACAGATCA TCAACATCGGTTCCATCGGCGCTCTGTCGGTCGTCCCCACGGCCGCGGTCTATTGTGCGACGAAGTTTGCCGTTCGCGCG ATATCCGACGGGCTACGCCAGGAGAGCAGCAACATTCGCGTGACCTGTGTGAACCCCGGCGTCGTCGAGAGCGAGCTTGC GCAAACCATCACCCACGAAGACACCATGGCAGCGATGGACGCCTATCGCGCCATCGCGTTACAGCCGGCCGATATCGCGC GTGCGATCCGGCAGGTGATCGAGGCTCCGGCGAGCGTCGACACCAGCGAGATCACGATCAGGCCGACCGCATCGAGCAAC TGA Protein sequence : MDKVILITGASSGIGEGIARELGAAGARLLLGARRLDRIEAIAEDIRSAGGTARAQILDVTDRQSMAAFAKSAVETWGRI DVLVNNAGVMPLSPLSALKLDEWEHMVDVNIKGVLWGIGAVLPVMTAQHSGQIINIGSIGALSVVPTAAVYCATKFAVRA ISDGLRQESSNIRVTCVNPGVVESELAQTITHEDTMAAMDAYRAIALQPADIARAIRQVIEAPASVDTSEITIRPTASSN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC20627.1 | hypothetical protein | Not tested | Internalin | Protein | 1e-34 | 45 |
| adh | CAI59964.1 | short-chain dehydrogenase | Not tested | LIPI-2 | Protein | 1e-39 | 42 |
