|
Name : Smed_5600 (Smed_5600) Accession : YP_001314277.1 Strain : Genome accession: NC_009621 Putative virulence/resistance : Unknown Product : succinic semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 568053 - 569507 bp Length : 1455 bp Strand : - Note : TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: sme:SMa1848 GabD5 succinate semialdehyde dehdyrogenase DNA sequence : ATGAGATTGAAGGACAAGAAACTTTTCCGGCAATTGAGCCTGATCGGCGGTGAGTGGATCGCCGGCGCTTCGGGCTCGGT CGTCGACGTCGTCGACCCTGCGAACGAGGCCGTTCTCGGCACCGTGCCGGACATGGGAACGGCCGAAACCCGCGCGGCCA TCGAAGCGGCCAATGCCGCATTCGGACCCTGGAAGAAGAAAACGCACGCCGAACGCGCCGCCCTGCTCGAGCGCTGGCAC GCGCTGATGATCGAAAACCTCGAAGACCTGGCGCTGCTCGTGACGATGGAACAGGGCAAGCCGCTCGAGGAGGCGCGTGG CGAGATCCGCTATGGCGCCGCGTTTGTGAAATGGTTCGCTGAAGAAGCCCGCCGCATCGGTGGCCAAACCATTCCCTCCC CGACGCCGGACCGCCGCATCGTCGTGCTGAAGGAAGCGGTCGGCGTCTGCGCCATCGTCACGCCGTGGAACTTCCCGAAC GCGATGATCACCCGGAAGATCGCCCCGGCGCTCGCCGCCGGCTGCACGGTGGTCATCAAGCCGTCGGAGTTCACGCCCTT CTCGGCGCTCGCCCTTGGCGTGCTCGCGGAGCGCGCCGGCATTCCGGCCGGTGTCGTCAATATAGTGACCGGCTTGCCGA CGGCGATCGGTAACGAGTTCATGACGAACGAGACGGTACGCAAGATCTCCTTCACCGGCTCGACCCGCGTCGGTTCGCTG CTGATGCGCGGCGCCGCAGACAGCGTCAAGAGGCTCTCGCTCGAACTCGGCGGTAATGCCCCCTTTATCGTTTTCGACGA CGCCGATCTCGATCTTGCAGTCGAAGGCGCGATCGCGTCGAAGTTCCGCAACGGTGGTCAGACCTGCGTCTGCGCCAACC GAATTCTCGTGCAGGCCGGCGTCTATGACGACTTCGCCGAGAAGCTCGGCGCCCGCGTCAACGTGATGAAGGTCGGCCCG GGGACGGAGCCCGGCATCGCGATTGGCCCGATGATCAATGAGGCTGCCATCGCCAAGATCGACCGTCACGTCGAGGACGC GATTGCCAAGGGCGCAAAGATAGCGGCACGCGGCAGGTCGCTGACGGAGGGCCGGCAATATACGGCCCCGATCGTGCTCA CCGGCGCGACGACTGAAATGCTGCTCGCCACTGAAGAGACCTTCGGCCCCGTCGCTCCACTTTTCCGCTTCGAGACCGAG GACGAGGCGATCGCCATCGCCAACGGCACGCCCTTTGGGCTGGCCGCCTATTTCTACACCGAAGGCCTGAAGCGCTCCTG GCGGGTGGCGGAAGCACTCGAGTTCGGCATGATCGGCCTCAATACCGGCGCCATCTCGACCGAAGTCGCGCCCTTCGGCG GCGTCAAGCAATCCGGCCTCGGACGCGAAGGCGCCCAGGTCGGCATTGAGGAATATCTCGAGATGAAGAGCTTCCACATC GGCGGGCTGGACTAG Protein sequence : MRLKDKKLFRQLSLIGGEWIAGASGSVVDVVDPANEAVLGTVPDMGTAETRAAIEAANAAFGPWKKKTHAERAALLERWH ALMIENLEDLALLVTMEQGKPLEEARGEIRYGAAFVKWFAEEARRIGGQTIPSPTPDRRIVVLKEAVGVCAIVTPWNFPN AMITRKIAPALAAGCTVVIKPSEFTPFSALALGVLAERAGIPAGVVNIVTGLPTAIGNEFMTNETVRKISFTGSTRVGSL LMRGAADSVKRLSLELGGNAPFIVFDDADLDLAVEGAIASKFRNGGQTCVCANRILVQAGVYDDFAEKLGARVNVMKVGP GTEPGIAIGPMINEAAIAKIDRHVEDAIAKGAKIAARGRSLTEGRQYTAPIVLTGATTEMLLATEETFGPVAPLFRFETE DEAIAIANGTPFGLAAYFYTEGLKRSWRVAEALEFGMIGLNTGAISTEVAPFGGVKQSGLGREGAQVGIEEYLEMKSFHI GGLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 8e-119 | 57 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-73 | 42 |
