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Name : Smed_5559 (Smed_5559) Accession : YP_001314240.1 Strain : Genome accession: NC_009621 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 526584 - 528296 bp Length : 1713 bp Strand : + Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rle:RL3798 putative ATP-binding component of ABC transporter DNA sequence : ATGACAAAGCCCGACACGCTGCTCTCGGTGCGCAATCTCTCGATTGATTTCCACCTGCGCACGCACGTGCTCCACGCGGT GCGCAACGTCAGCTTCGACCTGAAGCGCGGCCAGACCATGGCTCTCGTGGGCGAAAGCGGCTCGGGAAAATCGGTGACCG CGCGCGCCTTGATGCGGATCATTGATAAGCCCGGCCGAATGATCGGCGGCCAGATCCTGCTCGACGGCCCGAATGGCCCT GTGGATGTGGCACGCTTCAAGGAAGGCAGCCGCGAGGTGCTCGCCATCCGTGGTGGGCGGATCGGGTTGATCTTCCAGGA GCCAATGAGTTCCCTGTCGCCGGTCCACACTATCGGATCGCAGATCGTCGAAGCGGTGCGCCTGCATCGGCGGGTGTCCA AGTCGGAGGCGCGCGCCCGCTGTGTCGAACTGCTGCGTCAGGTCGAGATCCCGCAACCAGAGCTGATGGCCGACCGGTAT ACCTTCGAGTTTTCCGGCGGCATGCGGCAAAGGGCGATGATTGCGATGGCGCTCGCCTGCGATCCGCAGGTGCTTATTGC CGACGAGCCGACGACGGCGCTCGACGTGACCACTCAGGCAGAAATCCTCGACCTCATCAAGCGGCTGCAGGACGCACGCG GCATGGCAATGCTGCTTATCACCCACGACATGGGCATCGTCGCCGAAGTCGCGGATGACGTTGCCGTCATGCGCTTCGGC AAGATCGTTGAACAGGGGCCGGTTGACGACATATTCCACGCCAGCCAGCACCCGTATACGCGCCAGCTTCTCGACGCGAC GGTCAAGCTCGAAAGCGGCGCGGCGATCCGTGCTTTGCCGGCATCGCTGACACCGTCCGTCGAGCCAGTGCTTTCTGTTC GCAATCTCACCAAGATCTACGGCGCACCCTCGCGCATGTTCGCGCGCAGCGGCGGCCGCGGACTGGTGGCTGTCGATGAT GCCAGCCTCGACCTCTTCCCGGGCGAGAACCTTGGCATCGTCGGCGAAAGCGGCTCCGGCAAAACGACGCTTGGACGCAT GATCCTGCGCATTGTCGAGCCGACGTCCGGGACCGTGACGTATCGTGCCGATGCGACGTCTGCACCTGTCGACGTCACCG CGCTCGGCAAGGTAGATCTGCGGCGCTACCATCAGGATGTACGGCTGATCTTTCAGGATCCCTTCGCGTCGCTCAATCCA CGCATGACCGTGAAACAGATCATCGGCGATCCGCTCGTCATCTCCAAGGGCATGTCCGGCAAGGCCGTGGAGGTACGGGT TGCCGAACTTATGGGCAAAGTGGGTCTGGACCCGCTCGCCATGGAGCGCTACCCGCACGCATTTTCGGGCGGTCAGCGCC AGCGCATCGGCATCGCCCGGGCGCTTGCCCTCAATCCCACGGTCATCGTTGCGGACGAAGCGACATCCGCTCTCGATGTC TCGATCCGCAGCCAGATTCTCGATCTTATGATCGACATCCAGAAGCAGTTGCATCTCAGCTTCATCTTCATCTCCCACGA CATCTCGGTCGTGCGCTATTTCTGCGATCGCGTCGCCGTCATGCACCGGGGCAAGATCGTTGAAGTCGGTGATGCCGAAA CTATCTGCACCAACCCTTCGCAGCCCTACACGAGGCGGCTGATTTCCTCTGTTCCAAACCCGGATCCCCGCAACAAGCGC ATGCTTCACCGCCTGCGCACAGATCAAGTCTAA Protein sequence : MTKPDTLLSVRNLSIDFHLRTHVLHAVRNVSFDLKRGQTMALVGESGSGKSVTARALMRIIDKPGRMIGGQILLDGPNGP VDVARFKEGSREVLAIRGGRIGLIFQEPMSSLSPVHTIGSQIVEAVRLHRRVSKSEARARCVELLRQVEIPQPELMADRY TFEFSGGMRQRAMIAMALACDPQVLIADEPTTALDVTTQAEILDLIKRLQDARGMAMLLITHDMGIVAEVADDVAVMRFG KIVEQGPVDDIFHASQHPYTRQLLDATVKLESGAAIRALPASLTPSVEPVLSVRNLTKIYGAPSRMFARSGGRGLVAVDD ASLDLFPGENLGIVGESGSGKTTLGRMILRIVEPTSGTVTYRADATSAPVDVTALGKVDLRRYHQDVRLIFQDPFASLNP RMTVKQIIGDPLVISKGMSGKAVEVRVAELMGKVGLDPLAMERYPHAFSGGQRQRIGIARALALNPTVIVADEATSALDV SIRSQILDLMIDIQKQLHLSFIFISHDISVVRYFCDRVAVMHRGKIVEVGDAETICTNPSQPYTRRLISSVPNPDPRNKR MLHRLRTDQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-105 | 44 |
