Gene Information

Name : Smed_5512 (Smed_5512)
Accession : YP_001314198.1
Strain :
Genome accession: NC_009621
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 478380 - 479252 bp
Length : 873 bp
Strand : -
Note : PFAM: transposase IS66; KEGG: bms:BRA0556 IS66 family element, orf3, putative

DNA sequence : 
GTGAAATCCCTCCGGCCTACTCACCCGCCGCTTCCGCGGCTCGATCCGGGGCGCAAGCGCACCAAGCTCTGCCAGTTATG
GGCACAGGCCATCGATGATCGCCCATGGAATGGTCCGGCGCCACCGGCGGTCGCCTATATCTTTGCCGACAGCCGCAGCG
CCCGTGAGGTCGAGGGGCAACTATCGTCGTTTGGCGGCGTGCTTCAAGTCGATGGCTACCAAGCCTATAAGACCATGGCC
AAGCGCCGGGGGAAGAGCAATGTCGCCCCCATGCGGCTGGCGTTCTGCCTTGCCCATGCGCGGCGCAAGTTCGTCGATGT
CGTCAAACTGACCGGCTCCTCGGAGGCGCTGTCGATCCTTGCCAGGATTGCCGAGATCTATCGCATCGAAGCGAAGATCC
GAGGCGAAAGTGCCGATACCCGGCTGAGGGTGCGGCGTCGCGAGGCAGCGCCCATCATGAGCGAACTGAAGGCCCAGCTC
ACCGAACTGAGCGACGAGGTGTCGGCAAAATCGGCGCTTGGCAAGGCCGTCACCTACACGCTCAACCACTGGAACGGACT
GGCAGCCTTCCTAGAGGATGGCCGGATCGAAGTAGACTCCAATGTGGTCGAGCGTTCGATGAAATCGGTGGCCCTGACGA
GGAAGAATTCCTTGTTCGTGGGCAGTGCGCGCGGCGGAGAGACTTTCGCTGTGCTCGCATCACTGATCAACACGGCAAAG
CTTAACGGCGTGGATCCTGAAGTCTGGCTTGCCGATGTGCTGGAACGCATCATCTCCGGCAAAGTGAAAGCCAACCGGAT
GGAAAGCCTATTGCCGTGGGCTTGGAAGGCCGAACGCGAGGACATTGCAGATCAGGAGCGACGGGCGGCATGA

Protein sequence : 
MKSLRPTHPPLPRLDPGRKRTKLCQLWAQAIDDRPWNGPAPPAVAYIFADSRSAREVEGQLSSFGGVLQVDGYQAYKTMA
KRRGKSNVAPMRLAFCLAHARRKFVDVVKLTGSSEALSILARIAEIYRIEAKIRGESADTRLRVRRREAAPIMSELKAQL
TELSDEVSAKSALGKAVTYTLNHWNGLAAFLEDGRIEVDSNVVERSMKSVALTRKNSLFVGSARGGETFAVLASLINTAK
LNGVDPEVWLADVLERIISGKVKANRMESLLPWAWKAEREDIADQERRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4314 NP_289540.2 hypothetical protein Not tested OI-122 Protein 4e-30 41
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smed_5512 YP_001314198.1 transposase IS66 VFG1700 Protein 6e-40 41