Gene Information

Name : Smed_5092 (Smed_5092)
Accession : YP_001313803.1
Strain :
Genome accession: NC_009621
Putative virulence/resistance : Unknown
Product : 3-oxoacid CoA-transferase, A subunit
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1788
EC number : 2.8.3.5
Position : 41190 - 41897 bp
Length : 708 bp
Strand : +
Note : TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; KEGG: atc:AGR_L_1055GM 3-oxoacid CoA-transferase subunit A

DNA sequence :
ATGGACAAGACCGTAGACAGTCTCGCGGAGGCGGTCGCCGAGATCGGCGACGGCGCAACCGTTATGATCGGGGGCTTCGG
TGGTTCCGGAGCGCCTATAGAACTCATCCACGCCTTGATTGATCTGGGCCCGAACGACCTGACCATCATCAATAACAACG
CAGGCAACGGCCGAATCGGTATTGCCGCGATGATCGATGCCGGGATGGTGCGGAAGATGATTTGCTCATTCCCGCGTTCC
TCCGATCCGCGAGCGTTCACTGAGCGTTATCTGAAAGGATGTATCGAGCTTGAATTGGTACCCCAAGGGACTCTTGCAGA
GCGGATACGCGCCGGCGGCGCTGGTATCCCCGCTTTCTACACTCCGACTGCGTTCGGAACCGAGCTCGCCGCGGGCAAGC
CAACGGCGGAATTCGACGGTCGTACCTATGTGCAGGAAAGGTGGCTCAAGGCTGACTTTGCTATTGTCAAAGCGCATGTC
GGCGACACGCATGGCAACCTGACCTTCAACAAGGCTGCACGCAACTTCAACCCGCTGATGTGCATGGCGGCCAGGACGAC
CATCGTCCAGGTCTCCAGAATCGTGCCTGCCGGAGTTATCAATCCCGAGCACGTCATCACTCCGGGCATCTTCGTGAACA
AGGTCGTCGAAGTCCCCTTCCCGCAGCAGGAAGAAGAACTGGTACGAGCAGGAGTGAGCTACCCATGA

Protein sequence :
MDKTVDSLAEAVAEIGDGATVMIGGFGGSGAPIELIHALIDLGPNDLTIINNNAGNGRIGIAAMIDAGMVRKMICSFPRS
SDPRAFTERYLKGCIELELVPQGTLAERIRAGGAGIPAFYTPTAFGTELAAGKPTAEFDGRTYVQERWLKADFAIVKAHV
GDTHGNLTFNKAARNFNPLMCMAARTTIVQVSRIVPAGVINPEHVITPGIFVNKVVEVPFPQQEEELVRAGVSYP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18070.1 unknown Not tested TTSS locus Protein 1e-29 44