Gene Information

Name : Smed_5055 (Smed_5055)
Accession : YP_001313767.1
Strain :
Genome accession: NC_009621
Putative virulence/resistance : Resistance
Product : arsenate reductase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1393
EC number : -
Position : 3071 - 3502 bp
Length : 432 bp
Strand : -
Note : TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: rpa:RPA2257 arsenate reductase pump modifier

DNA sequence : 
ATGACAGACCCGATCGACATCGTCATCTATCACAACCCGGATTGCGGGACGTCGCGGAACACCTTGGCTATGATACGCAA
TGCCGGGATTGAACCGCATGTGGTCGAATATTTGAAGACTCCCCCAAGCCGGCCGCTGCTGGAGCAGTTGCTCGTCCGTA
TGGGCATATCCGTCCGCGACTTGGTTCGGGAAAAGGGGACACCATACCAGGAACTCGGCCTTGGCGATCCGGCTCTTACC
GATGGCCAACTCCTTGACGCGATGATGCAGCATCCCATCCTGATCAACCGCCCCATCGTCGTCTCACCACTTGGCGTGAA
GCTGTGCCGACCTTCAGAGGCCGTTCTGGAGGTCCTGCCCCAAGAGCAGAAGGGCGCTTTCATAAAGGAGGACGGCCAGG
TCGTCGTCGACGCGAGCGGCCGGCAGGTCTAG

Protein sequence : 
MTDPIDIVIYHNPDCGTSRNTLAMIRNAGIEPHVVEYLKTPPSRPLLEQLLVRMGISVRDLVREKGTPYQELGLGDPALT
DGQLLDAMMQHPILINRPIVVSPLGVKLCRPSEAVLEVLPQEQKGAFIKEDGQVVVDASGRQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC2 YP_001007634.1 arsenate reductase Not tested YAPI Protein 4e-41 63
arsC ADZ05768.1 arsenate reductase Not tested AbaR11 Protein 5e-38 56
arsR CAJ77019.1 arsenate reductase Not tested AbaR1 Protein 4e-38 56
arsC AFC76436.1 ArsC Not tested AbaR5 Protein 6e-38 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smed_5055 YP_001313767.1 arsenate reductase BAC0583 Protein 1e-43 66
Smed_5055 YP_001313767.1 arsenate reductase BAC0584 Protein 3e-43 64
Smed_5055 YP_001313767.1 arsenate reductase BAC0582 Protein 2e-42 62
Smed_5055 YP_001313767.1 arsenate reductase BAC0585 Protein 3e-41 59