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Name : Smed_5396 (Smed_5396) Accession : YP_001314097.1 Strain : Genome accession: NC_009621 Putative virulence/resistance : Virulence Product : conjugal transfer coupling protein TraG Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3505 EC number : - Position : 360345 - 362264 bp Length : 1920 bp Strand : + Note : VirD4 family DNA sequence : ATGATAGCGAATAGGATCGGCCTTGCAGTGGCTCCGGTCGTGCTTATGGCATTTCCTGTTATTGGAATGACCGGGTTTGA GCAATGGCTGTCAGCCTTAGGCAAGACGGATGCCGCAAGGCTGACCCTCGGCCAGGCCGGTATCGCCGTGCCTTACGTCA GCGCCGCAGCGATCGGCGTAATTTTTCTATTCGCAAGCGCCGGTTCCGCGAGCATCAGGTTCGCGGGGTGGGGCGCTCTA ACCGGAAGCACGGCAACGGTTCTGGTCGCGGCGATACGCGAGACGACACGTCTTGCCGCATTGGCCGCAGAGGTGCCTGG GGGCAAGTCCGCGGCCTCCTACATCGATCCTGCAACGATGATCGGTGCGGCGGCGGTGCTGATGGCGGGTTGTTTCGCGC TTCGCGTCGCAATGATCGGCAATGCAGCCTTCGCACCCGCCGAACCGAAACGGGTCCGTGGAAAACGCGCGCTGCATGGG CAGGCCGACTGGATGAGAATGCACGAGGCGTCAAAGCTCTTTCCCGCTACGGGCGGTGTCATCATTGGCGAGCGTTACCG AGTCGATAAGGACAGCACGGCAGCGCAGCCGTTTCGAGCTGATGATCCGGAGACCTGGGGCACCGGCGGCAAGTCTCCGC TCCTGTGCTTCGATGGATCGTTCGGATCCTCGCATGGAATCGTGTTCGCCGGATCTGGCGGCTTCAAGACAACGTCGGTG ACAGTCCCAACTGCGCTCAAATGGGGTGGGGCGCTCGTCGTCCTCGACCCCTCGAGCGAAGTGGCGCCGATGGTCTGTAA GCACCGCAGAGATGCAGGTCGTTTTATCCGTATCCTCGACCCCAAGGTACCGGAGACAGGCTTCAACGCACTCGACTGGC TTGGTCGCTACGGCGGGACGAAAGAGGAAGATATCTCTTCCGTCGCGTCGTGGATCATGAGTGACAGCGGCGGCATGCGC GCCGTGCGTGACGACTTCTTCCGTGCATCGGCTTTGCAACTATTGACGGCGTTGATTGCCGACGTCTGCCTGTCCGGCCA TACGGACAGGGAGAACCAGACATTGCGGCAGGTTCGAGCCAATCTCTCGGAGCCGGAGCCAAAACTGCGAGAGCGGCTGC AGTCAATCTACGACAATTCGGGCTCTGATTTCGTAAGGGAGAACGTCGCCGCATTCGTCAATATGACGCCGGAAACCTTC TCGGGGGTTTATGCAAATGCCGTGAAGGAGACCCACTGGCTGTCCTACCCAAATTATGCCGCACTCGTTTCGGGGTCCAC CTTCACGACCGACGCAGTCGCAGCCGGCGAGACGGATGTGTTCATCAATATCGGCCTGAAGACGTTGGAGACGCATTCCG GCCTTGCGCGCGTCATCATCGGCTCGTTCCTTAACGCTCTTTACAATCGCGATGGCGCGGCACAGGGCAGGGCACTTTTC CTCCTCGATGAGGTCGCGCGTTTAGGCTACATGCGCATTCTCGAAACCGCGCGTGATGCCGGCCGCAAATACGGCATCAC CCTCACGATGATTTACCAGTCGATCGGCCAAATGCGCGAGACCTACGGTGGCCGTGATGCGGCGAGCAAATGGTTCGAGA GCGCGAGCTGGATCTCTTTCGCTGCCATTAACGATCCGGAGACTGCTGAGTACATCTCGAAGCGCTGCGGCATGACGACC GTCGAGATTGACCAGATCAGTCGCAGTTCCCAGTCGAACGGATCGTCGCGGACCCGTTCAAAGCAGCTTGCTGCAAGACC ACTGATTCAGGCGCATGAGGTGCTGCGAATGCGCGCCGACGAGCAGATCGTATTCACCGTCGGGAATGCGCCGCTTCGAT GCGGCCGCGCCATCTGGTTCCGACGCGACGACATGAAGGCATGCGTGGGAACGAATCGCTTTCAAGGACCCCTTGGATGA Protein sequence : MIANRIGLAVAPVVLMAFPVIGMTGFEQWLSALGKTDAARLTLGQAGIAVPYVSAAAIGVIFLFASAGSASIRFAGWGAL TGSTATVLVAAIRETTRLAALAAEVPGGKSAASYIDPATMIGAAAVLMAGCFALRVAMIGNAAFAPAEPKRVRGKRALHG QADWMRMHEASKLFPATGGVIIGERYRVDKDSTAAQPFRADDPETWGTGGKSPLLCFDGSFGSSHGIVFAGSGGFKTTSV TVPTALKWGGALVVLDPSSEVAPMVCKHRRDAGRFIRILDPKVPETGFNALDWLGRYGGTKEEDISSVASWIMSDSGGMR AVRDDFFRASALQLLTALIADVCLSGHTDRENQTLRQVRANLSEPEPKLRERLQSIYDNSGSDFVRENVAAFVNMTPETF SGVYANAVKETHWLSYPNYAALVSGSTFTTDAVAAGETDVFINIGLKTLETHSGLARVIIGSFLNALYNRDGAAQGRALF LLDEVARLGYMRILETARDAGRKYGITLTMIYQSIGQMRETYGGRDAASKWFESASWISFAAINDPETAEYISKRCGMTT VEIDQISRSSQSNGSSRTRSKQLAARPLIQAHEVLRMRADEQIVFTVGNAPLRCGRAIWFRRDDMKACVGTNRFQGPLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virD4 | YP_001610010.1 | conjugal transfer coupling protein TraG | Not tested | Not named | Protein | 2e-101 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Smed_5396 | YP_001314097.1 | conjugal transfer coupling protein TraG | VFG2242 | Protein | 3e-102 | 45 |
