|
Name : Smed_5358 (Smed_5358) Accession : YP_001314062.1 Strain : Genome accession: NC_009621 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : 3.6.3.12 Position : 322150 - 323859 bp Length : 1710 bp Strand : + Note : catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGACCATCGTCGGGTGGCTGCAGATCAGCCTCCTCTTTCTCGCCGTCCTCGTCGTCATCAAGCCGCTGGGGCTTCACAT GGCGCGGGTCTTTTCCGGTGAGCGCAACGCATTCTCCCCGCTTTTCAGCCCGATCGAGCGTGGCCTCTATGCGGCCGCCG GAGTCGATCCGGTCAAGGAGCAGGGTTGGCTTGCCTACACGCTGTCGATGCTGGCTTTCAGTCTCGCAGGCTTCGTCGGG CTCTATGCGATCCTCAGGCTCCAGGCCTGGCTGCCATTGAACCCGCAGGGTTTCGGCAATGTGCCGCCGGGCCTTGCCTT CAACACGGCCGTCAGCTTTGTCACCAACACCAACTGGCAGAACTACGCCGGCGAGACGACCCTCAGCCATTTCAGCCAGA TGATGGGGCTCACGGTCCAGAACTTCGTGTCCGCCGCCACGGGCATCGCGATTGCGCTCGCGATCATCAGGGCATTCGCG CGGTCGGCCGCGTCGACGGTCGGGAACTTCTGGGTGGATCTCACGCGGGCCACGCTCTATGTCCTCCTGCCGCTTTCCAT AGTCGTGGCTCTCGCATTCGTGGCGATGGGACTGCCGCAGACCTTCGATGGGGCAGTGAACGCGACGACGCTCGAAGGCG CGCGACAGACCATCGCGCTCGGGCCGGTCGCCAGCCAGGAGGCGATAAAGCAGCTCGGCACCAATGGCGGCGGCTTCTTC AACGTCAATGCCGCCCACCCCTATGAAAATCCGACGGCGCTTTCCAACTACCTCAACATCTTTGCGATGCTGTCGATCTC GGCGGCGCTGCTCTATACCTTCGGCCAACTCGTCGGCAACTGCCGTCAGGGCTGGGCCTTCGCCGCGGTTACCGCTTTCT TCCTGATCGCGGGCGTAGGCGTGGTCTACTGGGCCGAGGCGCAGGGAAATACGATCCTGTCGGCGGTCGGTCTCGATCCG GCCGACGGCAATATGGAAGGCAAGGAAGTCCGCTTCGGGCAGGCCATGACCGCGCTTTACGCGACGGTGACCACCGGGCT TTCGAACGGCGGCGTCAACGGCATGCACGGCTCCTTGACCGGGCTCGGCGGTCTTGTGCCGATGTTTCTCATGCAGCTTG GCGAGGTTCTGCCCGGAGGTGTCGGCTCCGGCCTCTATGGCATGATCGTCTTCGCGATCCTCGCCGTCTTCGTTGCCGGC CTAATGGTCGGCCGCACGCCGGAACTGCTCGGCAAGAAGATCGAAGCGCGCGAGATGAAATTCGCAATCCTTGCCGTGCT CGTTCTGCCGCTTACCGTCCTCGGTTTTTCCGCGGTTTCCGCGGTCACGCCTTCGAACGTATCGAGCATCGGCACTGGCG GCCCGCACGGTCTCTCGGAAATCCTCTATGCCTATACGTCGGCCGCCGGAAACAATGGTTCGGCTTTCGCCGGGCTGACC GGGAACACGCCGTGGTACAATACGACGCTCGGGATTGCGATGCTGCTCGGCCGCTTCGCCTATGCAGTCCCCGTGCTTGC CATCGCCGGTTCGATAGCCGTCAAAACCCGCGTCGCGGCTTCGAAGGGTACCTTCCCGACCGACACGCCGCTCTTTGCTG GTCTGCTGATCGGTATCATCCTTATTCTTGGCGGTCTGCAGTTTTTCCCCGCGCTCGCTCTCGGTCCCATCATCGAGCAT TTTGCGATGCTCTCGGGCGAGACCTTCTGA Protein sequence : MTIVGWLQISLLFLAVLVVIKPLGLHMARVFSGERNAFSPLFSPIERGLYAAAGVDPVKEQGWLAYTLSMLAFSLAGFVG LYAILRLQAWLPLNPQGFGNVPPGLAFNTAVSFVTNTNWQNYAGETTLSHFSQMMGLTVQNFVSAATGIAIALAIIRAFA RSAASTVGNFWVDLTRATLYVLLPLSIVVALAFVAMGLPQTFDGAVNATTLEGARQTIALGPVASQEAIKQLGTNGGGFF NVNAAHPYENPTALSNYLNIFAMLSISAALLYTFGQLVGNCRQGWAFAAVTAFFLIAGVGVVYWAEAQGNTILSAVGLDP ADGNMEGKEVRFGQAMTALYATVTTGLSNGGVNGMHGSLTGLGGLVPMFLMQLGEVLPGGVGSGLYGMIVFAILAVFVAG LMVGRTPELLGKKIEAREMKFAILAVLVLPLTVLGFSAVSAVTPSNVSSIGTGGPHGLSEILYAYTSAAGNNGSAFAGLT GNTPWYNTTLGIAMLLGRFAYAVPVLAIAGSIAVKTRVAASKGTFPTDTPLFAGLLIGIILILGGLQFFPALALGPIIEH FAMLSGETF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 4e-78 | 48 |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 3e-78 | 48 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 2e-64 | 42 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 4e-64 | 42 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-64 | 42 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-64 | 42 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-64 | 42 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-64 | 42 |
