|
Name : Smed_5077 (Smed_5077) Accession : YP_001313789.1 Strain : Genome accession: NC_009621 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 23806 - 25455 bp Length : 1650 bp Strand : - Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMa1434 probable ABC transporter, ATP-binding protein DNA sequence : ATGACTGCGTCGGACAAGCCAATACTGCGTATCGACGGCCTGACGGTGGACTTCCTGTCCGAAGGTGATCCGGTGCGCGC CGTGGACAATGTCTCGTTCGATGTCTGCCCGGGCGAGACGCTCGTCATCCTCGGCGAGAGCGGATCGGGCAAGAGCGTCA GCACCGGTACGGTGATGGGGCTGATCGATTGCCCCCCGGGCGACATCGTTTCGGGCACCCTGGTATTCGACGGGACCGAT CTTTCCCGCCTCGACAACGAAGGCAGGCGTGAACTGAACGGTCGCCGTATCGCCATGATCTTCCAGGACCCGCTCGCCTA TCTCAATCCGGTCTATACTGTCGGCCGGCAGATCGCCGAGGTTTTCGAAAGCCATGGCGCAGGCGAGGGCGGGGCGATGC GCGGAAGAGTCGTGCGCCTGCTGGAACGGGTTGGGATCCCGGAAGCGGAAACGCGGGTCGATTACTATCCGCACCAGTTC TCCGGCGGACAGAGGCAACGCGTGATGATCGCGATGGCGATTGCGCTCGAACCGGACATTCTGATCGCCGACGAGCCGAC CACCGCGCTCGACGTCAGTGTCCAGGCGCAGATCCTCGACCTTCTGCGGGACCTGCAGCGCGAAACCGGAATGGCGCTGA TCATGATCACCCACGATCTGGAGGTCGCCGCGGCCATGGCGGACCGGATCATCGTGATGAATGCCGGCAAGGTGGTGGAG AGCGGCAGGGCCGAGGATGTCTTCACCAATCCGCGCCACAGCTATACCCGCCGGCTGATGTCGGCGGTGCCTCATGGCGA CCCAAAGAAGCGAAGCCGGCCTGTCGAACAGGAGGTCCTGCTGCAGGTCGCCCATCTGAGCAAGCACTATAAGCTCGGCT CCGGCCCGTTTGCGCCCAAACGCGAGTTCAAGGCAGTGGACGATGTGAGCTTTACGCTTCGTCGCGGCGAAACGGTCGGC ATCGTCGGAGAGTCCGGTTCGGGTAAATCCAGCATTGCGCGCATGCTGCTGAGGCTCAACGAGCCGACATCGGGCTCGGC GCTCTTTGCCGGCGAGGACATCTTCAAGCTCGAGGGCAGGGCGCTCAACGGATTTCGCCGGAAAGTGCAGATGGTGTTTC AGGATCCGTTCGGCTCGATGAACCCGCGCATGAACGTCCGTTCGATCATTTCAGAACCCTGGGCGATCCACCGGGATATC CTGCCGCGCCAACGCTGGAACGAACGGGTCGTTGAACTGCTGGAGCTTGTCGGCCTGAAGCCGGAGCATGCGGAGCGCTA TCCGCATCAATTTTCGGGCGGGCAGCGGCAACGCATCGCCATTGCCCGGGCGCTCGCCAGCGAACCCGAGCTCATCGTCT GCGACGAAGCGGTCTCGGCGCTCGACGTGTCGATCCAGATGCAGGTCATCGAACTCCTGGCCGATCTCCGCCAGCGCCTC GGCCTCTCCTACATCTTCATCACCCATGATCTGCCCATCGTGCGTCAATTCGCAGACCGGATCCTGGTGATGCAACGAGG CAAGATCGTCGAGGAGGGTGAGACGGAAGCTCTTTTCGTCTCGCCTCGGCACGAATACACGCGAGCCCTGCTGAACGCCG TCCCCCAACCGAAATGGCTGCAGCGCGATCCGACCCCGCTCGCGGGGTAG Protein sequence : MTASDKPILRIDGLTVDFLSEGDPVRAVDNVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDCPPGDIVSGTLVFDGTD LSRLDNEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEVFESHGAGEGGAMRGRVVRLLERVGIPEAETRVDYYPHQF SGGQRQRVMIAMAIALEPDILIADEPTTALDVSVQAQILDLLRDLQRETGMALIMITHDLEVAAAMADRIIVMNAGKVVE SGRAEDVFTNPRHSYTRRLMSAVPHGDPKKRSRPVEQEVLLQVAHLSKHYKLGSGPFAPKREFKAVDDVSFTLRRGETVG IVGESGSGKSSIARMLLRLNEPTSGSALFAGEDIFKLEGRALNGFRRKVQMVFQDPFGSMNPRMNVRSIISEPWAIHRDI LPRQRWNERVVELLELVGLKPEHAERYPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLADLRQRL GLSYIFITHDLPIVRQFADRILVMQRGKIVEEGETEALFVSPRHEYTRALLNAVPQPKWLQRDPTPLAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-94 | 45 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-66 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-66 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-66 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-66 | 43 |
