Gene Information

Name : Smed_5203 (Smed_5203)
Accession : YP_001313913.1
Strain :
Genome accession: NC_009621
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : -
Position : 163540 - 164544 bp
Length : 1005 bp
Strand : +
Note : catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway

DNA sequence :
ATGAGTTTCAATCTCCGAAATCGCTCGCTTCTGACCGTGCAGGACTACACACCGCGGGAGTTTCGTTATCTCGTAGATCT
CGCCCGCGATCTGAAGCGCGCGAAATATGCGCGGACCGAACAAGAACATTTGAAAGGCAAGGAAATCTGCCTGATCTTCG
AAAAGACATCGACGCGTACAAGATGCGCATTCGAAGTGGCCTGCTCGGATCAAGGCGCTAATGTTACCTATCTTGACCCT
GCCGGATCGCAGATCGGGCACAAGGAGTCTTTCAAGGACACCGCCCGCGTACTGGGCCGCATGTACGACGCCATCGAATA
CCGCGGCGCCTCACAAGCTGGTGTGGAGACTCTCGCGAAATATGCGGGTGTGCCGGTCTACAATGGCCTCACCGACGAGT
ATCATCCCACGCAGATGATCGCCGACGTCATGACTATGCGCGAGCATAGCGACAAGCCGATCAGCGAAATCAAGTACGCC
TATATCGGCGACACCCGATCGAACATGGGTCATTCTCTGCTCATCGTCGGCTGTTTGATGGGGATGGATGTGCGCATATG
CGGTCCCCGATCTCTGTGGCCGTCGGAAGAATACCAGACTATCGCCAAAGAACTTAAGGCTCAGTCCGGCGCGCGCCTCA
TGATTACGGACGATCCGAAGGCAGCAGTGGAGGGAGTTGACTTCATTCACACGGACGTCTGGGTTTCGATGGGTGAGCCG
AAGGAGGTCTGGAAAGAACGCATTCAGTTGCTTACGCCCTATCAGGTCAATGCCGAGTTGATGGCCGCAAGCGGCAACCC
GCAAACCAAGTTCATGCATTGCCTCCCGGCCTACCACGATACCGAGACCGCTATCGGAAAGCAGATTTCCGAGGACTACG
GGATGTCGAATGGTCTTGAGGTCACCGACGAAGTGTTCGAGTCGCAAGCGAACGTAGCATTCGAACAGGCCGAGAATCGC
ATGCATACGATCAAGGCACTGCTGGTTGCAACCCTGGGAGACTGA

Protein sequence :
MSFNLRNRSLLTVQDYTPREFRYLVDLARDLKRAKYARTEQEHLKGKEICLIFEKTSTRTRCAFEVACSDQGANVTYLDP
AGSQIGHKESFKDTARVLGRMYDAIEYRGASQAGVETLAKYAGVPVYNGLTDEYHPTQMIADVMTMREHSDKPISEIKYA
YIGDTRSNMGHSLLIVGCLMGMDVRICGPRSLWPSEEYQTIAKELKAQSGARLMITDDPKAAVEGVDFIHTDVWVSMGEP
KEVWKERIQLLTPYQVNAELMAASGNPQTKFMHCLPAYHDTETAIGKQISEDYGMSNGLEVTDEVFESQANVAFEQAENR
MHTIKALLVATLGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 8e-92 59
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-91 59
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-91 59
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-91 59
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-91 59
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-91 59
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-91 59