|
Name : Smed_6245 (Smed_6245) Accession : YP_001314777.1 Strain : Genome accession: NC_009621 Putative virulence/resistance : Unknown Product : succinic semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 1165205 - 1166677 bp Length : 1473 bp Strand : - Note : TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: sme:SMa0805 GabD4 succinate-semialdehyde dehdyrogenase DNA sequence : ATGACGATTTCGGAAACACTGCTCGTCAAACTGAAGGATCCCAGCCTCGCTGTCGATAAGGGTTTGATCGGCGCCGAATG GCTTGACAGAAGCGACAGCGGCAAGACGTTCGATGTCAGCAATCCGGCGACCGGCGAGGTCATCGCCATCTTGCCCGACA TGAGTCGGTCCGAAACCGCACGTGCGATCGATGCGGCCCACGCGGCGCAAAGGGCATGGGCGGAGAAGACGGGCAAGGAA CGCGCCGCGGTGCTGCGCAACCTGTACGACCTCGTGATTGCCAATGCCGAAGACCTCGCCACCATCCTGACGATGGAAAT GGGTAAGCCGCTTACGGAGGCGAAGGGCGAGATTCTCTACGGCGCGTCTTACGTCGAGTGGTTTGGCGAGGAGGCGAAGC GTGTCTACGGCGACACGATTCCGGGCCACCAGCCGGACAAGCGCATCATCGTCCTCAAACAGCCGATCGGGGTCGTGGCG GCGATCACGCCGTGGAATTTTCCGAATGCGATGCTCGCCCGAAAACTGGCGCCTGCCGCTGCCGCAGGCTGCGCAGTGGT TTCGAAGCCTGCCGCGGAGACGCCGCTGTCGGCACTGGCGATAGCCTTGCTCGCAGAGCGCGCCGGCCTGCCTGCCGGAG TCTTCAACGTTATCCTGTCGACCGATTCCGCGGAAGTTGGCAAGGAAATGTGTGCCAATGACAAGGTTCGCAAGCTGACC TTCACCGGCTCCACCAATGTCGGCAAAATATTGATGCGCCAGGGCGCCGACCAGATCATGAAGCTGGGCTTGGAACTCGG AGGCAACGCGCCGTTCATCGTCTTTGACGACGCCGATCTCGACGCCGCTGTCGAAGGCGCCATGGTCGCCAAGTACCGCA ACAACGGGCAGACCTGCGTCTGCGCCAATAGGCTTTTCGTGCAGGCCGGAATTTACGACGCCTTTGCCGCGAGGCTGACT GCCAAGGTTAGCGAGATGACGATCGGCGACGGGTTTGAGCCGGACGTCGACGCTGGCCCGCTGATCTCGGAAAAGGCTCT CGCCAAGGTCGAGGAACATATCCGGGACGCCGTGACGAAGGGTGCCGATCTGGTTCTGGGCGGCAATGCGCGGGGCGGTT TGTTTTTCGAGCCGACCGTCCTGACCGGAGCCACCATGGACATGAAGATTGCTCGCGAGGAGACGTTCGGTCCCGTCGCG CCGCTCTTCAAGTTCGAGACCGAGAATGAAGTTGTCAGTATGGCCAACAACACCGAGTTCGGCTTAGCATCCTATTTTTA CTCCAAGGATGTGAGTAAGGTATTCCGCGTGGCGGAAGCGCTAGAATACGGCATGGTGGGCATCAATACAGGCCTGATCT CTACGGAAGTAGCTCCCTTCGGCGGTGTCAAGCAGTCGGGGCAAGGCCGCGAAGGCTCCAAATACGGCATCGATGACTAT GTGGAAACCAAGTATCTTTGCCTCAGTATTTGA Protein sequence : MTISETLLVKLKDPSLAVDKGLIGAEWLDRSDSGKTFDVSNPATGEVIAILPDMSRSETARAIDAAHAAQRAWAEKTGKE RAAVLRNLYDLVIANAEDLATILTMEMGKPLTEAKGEILYGASYVEWFGEEAKRVYGDTIPGHQPDKRIIVLKQPIGVVA AITPWNFPNAMLARKLAPAAAAGCAVVSKPAAETPLSALAIALLAERAGLPAGVFNVILSTDSAEVGKEMCANDKVRKLT FTGSTNVGKILMRQGADQIMKLGLELGGNAPFIVFDDADLDAAVEGAMVAKYRNNGQTCVCANRLFVQAGIYDAFAARLT AKVSEMTIGDGFEPDVDAGPLISEKALAKVEEHIRDAVTKGADLVLGGNARGGLFFEPTVLTGATMDMKIAREETFGPVA PLFKFETENEVVSMANNTEFGLASYFYSKDVSKVFRVAEALEYGMVGINTGLISTEVAPFGGVKQSGQGREGSKYGIDDY VETKYLCLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-128 | 59 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 3e-73 | 41 |
