Gene Information

Name : Smed_4501 (Smed_4501)
Accession : YP_001313234.1
Strain :
Genome accession: NC_009620
Putative virulence/resistance : Unknown
Product : glycerol kinase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0554
EC number : -
Position : 986674 - 988167 bp
Length : 1494 bp
Strand : +
Note : TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: sme:SMb21009 probable glycerol kinase, similar to sugar kinases protein

DNA sequence :
ATGGGCGGATATATTCTCGCGATCGATCAGGGCACGACCTCGACCCGCGCGATCGTTTTCGACGGCAACCAGAAAATTGC
CGGCATCGGCCAGAAAGAGTTCAAGCAGCATTTTCCGAAATCCGGCTGGGTCGAACACGATCCCGAGGAAATCTGGCAGA
CCGTCCTCAGCACAGTCAGGGAAGCAATCGAGAAGGCCGGCATCGGCGCGAGCGACGTTGCCGCGATCGGCATCACCAAC
CAGCGGGAGACGGTCGTTGTCTGGGAGCGCGATACCGGCAAGCCGATCCACAACGCCATCGTCTGGCAGGACCGCCGCAC
CGCCGCCTTCTGCGACAAGCTCAAGAAGAAGGGATTGGAAAAGACCTTCGTCAAGAAGACAGGCTTGCTGCTAGACCCCT
ATTTTTCAGGAACGAAGCTCAATTGGCTGCTTTCCAACGTGAAGGGAGCGCAGGCGAGGGCGGCGAGCGGCGAACTCTGC
TTCGGCACGATTGATACGTTCCTGATCTGGAGATTGACACAAGGCAAGTGCTTTTGCACCGACGCAACGAATGCCTCGCG
CACGCTCATCTACAACATTGCTGAGAACGCCTGGGATGATGAGTTGCTGCGCATTTTGCGCGTGCCGAAGCAGATGCTGC
CGGAGGTCAAGGACTGTGCGGCCGATTTCGGCATTACCGATCCGTCCCTTTTCGGCGCGGCGATCCCGATCCTCGGCGTC
GCCGGCGACCAGCAGGCGGCAACGATCGGCCAGGCCTGTTTCAAGCCCGGCATGCTGAAATCGACCTATGGAACCGGCTG
CTTTGCCCTGCTCAATACCGGAAAGGATATGGTTCGTTCGAAGAACCGTCTCCTCACCACCATCGCCTACCGTCTCGACG
GCGAAACGACCTATGCGCTCGAAGGCTCGATCTTCGTGGCCGGTGCTGCCGTGCAATGGCTGCGCGACGGGCTCAAGGTC
ATCAAGGCGGCACCCGATACGGGCTCGCTTGCCGAGAGTGCCGATCCCTCGCAGGAAGTCTATCTCGTACCGGCCTTTAC
CGGCCTTGGCGCGCCCCATTGGGACCCGGACGCGCGGGGCGCGATTTTTGGCATGACGCGCAACACCGGTCCGGCGGAGT
TCGCGCGGGCTGCACTCGAAGCCGTCTGCTACCAGACCCGCGACCTGCTGGAGGCCATGCACAAGGACTGGCGCCGCAAC
GGCAATGATACCGTGCTGCGTGTCGATGGCGGCATGGTCGCCTCGGACTGGACGATGCAGCGCCTGTCGGACCTCCTCGA
TGCTCCGGTCGACCGGCCGATGATTCTCGAAACGACGGCACTCGGCGTCGCTTGGCTCGCCGGGAGTCGCGCCGGCGTCT
GGCCGAACCAGGAAGCGTTCGCCAAATCCTGGGCTCGCGACCGGCGCTTCGAGCCACAAATGGACGAGACCACGCGCAAA
GTGAAGCTCAAGGGTTGGCGCAGCGCCATCAAGCGGACTTTGGCGGCGGCCTGA

Protein sequence :
MGGYILAIDQGTTSTRAIVFDGNQKIAGIGQKEFKQHFPKSGWVEHDPEEIWQTVLSTVREAIEKAGIGASDVAAIGITN
QRETVVVWERDTGKPIHNAIVWQDRRTAAFCDKLKKKGLEKTFVKKTGLLLDPYFSGTKLNWLLSNVKGAQARAASGELC
FGTIDTFLIWRLTQGKCFCTDATNASRTLIYNIAENAWDDELLRILRVPKQMLPEVKDCAADFGITDPSLFGAAIPILGV
AGDQQAATIGQACFKPGMLKSTYGTGCFALLNTGKDMVRSKNRLLTTIAYRLDGETTYALEGSIFVAGAAVQWLRDGLKV
IKAAPDTGSLAESADPSQEVYLVPAFTGLGAPHWDPDARGAIFGMTRNTGPAEFARAALEAVCYQTRDLLEAMHKDWRRN
GNDTVLRVDGGMVASDWTMQRLSDLLDAPVDRPMILETTALGVAWLAGSRAGVWPNQEAFAKSWARDRRFEPQMDETTRK
VKLKGWRSAIKRTLAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glpK YP_005139160.1 glycerol kinase Not tested Not named Protein 1e-93 47