Gene Information

Name : Smed_4216 (Smed_4216)
Accession : YP_001312954.1
Strain :
Genome accession: NC_009620
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 699198 - 699968 bp
Length : 771 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20569 putative ABC transporter ATP-binding protein

DNA sequence :
ATGGCTGAAGTAAGAAGCCTACGCAGGGGGGAGGTGGCGCTCCGCGACCTCTCGAAATCCTTCCGGATCAATGGAAGGCC
GCTCAGCGTCCTCAGGAACCTTAATCTGGATATCCGGTCCGGGGAGTGCCTCGCGATCGTCGGGGCAAGCGGATCCGGCA
AGACGACATTGCTGCGTGTTCTCGCGGGCCTCGAAACCGCCGATTCCGGCCGAGCTTTGATCGACGGTCGCCCGGTCACC
GGCGTCGGCAGGGAGCGCGCGGTCATTTTCCAGGAGCCGCGGCTGCTTCCATGGCTGACCGTCCTCGGCAACGTGGCCTT
CGGCCTTGAGGTACGGGGCGAGGATCCGGGACGCGCCGACGAACGCGCACGCCACTATATCGCCCTTGTAGGCCTTGCCG
ATTTTCAGGACGCCTATCCGAAACAGCTTTCGGGTGGAATGGCGCAACGGGTCGGGCTTGCGCGGGCGCTGACGGTTCAG
CCCGAAATTCTGCTGCTCGACGAACCGTTGGGCGCGCTCGATGCCATGACGAAGCTCACGATGCAGCAGGAACTGGAGCG
CATCTGGCGCGAGGAGAATGTGACCATGGTGCTCGTCACCCACGATCTCGAGGAAGCGCTTTATCTCGCGGACCGTGTTC
TGATCTTACCGAAGCAAAAGGACGCTTCGCCGCGCCTGATCGGGATCGATCTGCCGCGACCGCGTGATCGCAGCGAAGCG
CGCTTCGTCCGATACCGTCAGGAGCTGCTTCGCGAATTCGGGCTGCACTGA

Protein sequence :
MAEVRSLRRGEVALRDLSKSFRINGRPLSVLRNLNLDIRSGECLAIVGASGSGKTTLLRVLAGLETADSGRALIDGRPVT
GVGRERAVIFQEPRLLPWLTVLGNVAFGLEVRGEDPGRADERARHYIALVGLADFQDAYPKQLSGGMAQRVGLARALTVQ
PEILLLDEPLGALDAMTKLTMQQELERIWREENVTMVLVTHDLEEALYLADRVLILPKQKDASPRLIGIDLPRPRDRSEA
RFVRYRQELLREFGLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-46 48