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Name : Smed_4174 (Smed_4174) Accession : YP_001312912.1 Strain : Genome accession: NC_009620 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 647437 - 649269 bp Length : 1833 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAATCTATTCAAGCCTCTCGGCGCGACCCCTTCGGTCACCCAAGGGCCGCTCCCCGCGTCCCAAAAGGTCTACAGGCC GGGCGATATCCATCCCGACATCCGCGTGCCGATGCGCGAGATCACCCTGCATCCGACCTCGGGCGAACCGCCGGTGACCG TATACGACGCCTCCGGACCCTACACGCTTGAGAATGCCGATATCCGCATCGACGCAGGACTGCCGCGTCTGCGCCACGAC TGGATCCTGAAGCGCGGCGGCGTGGAAAGTTACGAGGGCCGAGCGGTCAAGGCGGAAGACAACGGCTTTGCGAGCGGCGA GCGCCTCACGCCGGAATTCCCGGTGCGCAATCAGCCGCTTCGCGCCAAGCCGGGACAAGCGGTCACCCAGATCGCCTTTG CCCGCGCCGGCATCATCACACCGGAAATGGAGTTCATCGCCATCCGCGAAAATCTCGGCCGCAAAGCCGCGAAGGAGGTA CTCACGCGCGATGGCGAGAGCTTCGGCGCATCGGTCCCCGATTTCGTCACGCCGGAATTCGTCCGCCAGGAGGTGGCCGC CGGCCGGGCCATCATTCCGGCCAACATCAACCATCCGGAGTCGGAGCCGATGATCATCGGCCGCAACTTTCTGGTGAAGA TCAACGCGAATATCGGCAATTCCGCCGTGACTTCCTCGATGGCCGAGGAAGTCGAGAAGATGGTATGGGCGACCCGCTGG GGCGCCGATACGGTCATGGACCTTTCCACCGGCCGCAACATCCACAATATCCGCGAATGGATCATCCGCAATTCGCCGGT GCCGATCGGCACGGTACCGCTTTACCAGGCACTGGAAAAGGTGAACGGCATTGCCGAGGACCTTTCCTGGGAGGTCTTCC GCGACACGCTAATCGAACAGGCGGAACAGGGCGTAGACTATTTCACCATTCATGCCGGCGTCAGGCTCCACTATATCCCG CTCACCGTCGATCGAGTCACCGGCATCGTCTCGCGCGGCGGATCGATCATGGCCAAGTGGTGTCTGCATCACCACCAGGA GAGCTTCCTCTACGAGCATTTCGAGGAGATCTGCGACATCTGCCGCGCCTATGACGTTTCCTTTTCGCTGGGCGACGGTC TGCGGCCCGGTTCTATCGCCGACGCCAACGACCGGGCGCAGTTCGCCGAACTCGAAACGCTCGGCGAGTTGACGCAGATC GCCTGGGCCAGGGATTGCCAGGTGATGATCGAAGGCCCCGGCCACGTGCCGATGCACAAGATCAAGGAGAACATGGACAA GCAGCTTGCCGTTTGCGGCGAAGCGCCTTTCTACACGCTGGGGCCGCTGACCACCGATATCGCGCCGGGCTACGACCACA TCACCTCCGGCATCGGCGCGGCGATGATCGGCTGGTTCGGCACCGCGATGCTCTGCTACGTGACGCCGAAGGAGCATCTG GGCCTTCCCGACCGCAACGACGTCAAGATGGGCGTCATCACCTACAAGATCGCCGCGCATGCCGCCGATCTCGCCAAGGG GCATCCGGCCGCGCGCATCCGTGACGATGCACTGTCGCGCGCGCGCTTCGAGTTCCGCTGGGAGGATCAGTTCAATCTCT CGCTCGACCCGGAGACGGCGCGGAACTTCCATGACGAAACGCTGCCGAAGGAGGCGCACAAGGTCGCGCATTTCTGCTCC ATGTGCGGTCCGAAATTCTGTTCGATGCGGATTTCCCACGACATCCGTGCCGAGGCGCAGAAGGAGGGCCTTGAGGCGAT GGCAGCGAAATACCGCGACGGCGGCGATCTCTATATGCCGGTCGATGGGAGCGATGCGCCCACTGGAGAATGA Protein sequence : MNLFKPLGATPSVTQGPLPASQKVYRPGDIHPDIRVPMREITLHPTSGEPPVTVYDASGPYTLENADIRIDAGLPRLRHD WILKRGGVESYEGRAVKAEDNGFASGERLTPEFPVRNQPLRAKPGQAVTQIAFARAGIITPEMEFIAIRENLGRKAAKEV LTRDGESFGASVPDFVTPEFVRQEVAAGRAIIPANINHPESEPMIIGRNFLVKINANIGNSAVTSSMAEEVEKMVWATRW GADTVMDLSTGRNIHNIREWIIRNSPVPIGTVPLYQALEKVNGIAEDLSWEVFRDTLIEQAEQGVDYFTIHAGVRLHYIP LTVDRVTGIVSRGGSIMAKWCLHHHQESFLYEHFEEICDICRAYDVSFSLGDGLRPGSIADANDRAQFAELETLGELTQI AWARDCQVMIEGPGHVPMHKIKENMDKQLAVCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHL GLPDRNDVKMGVITYKIAAHAADLAKGHPAARIRDDALSRARFEFRWEDQFNLSLDPETARNFHDETLPKEAHKVAHFCS MCGPKFCSMRISHDIRAEAQKEGLEAMAAKYRDGGDLYMPVDGSDAPTGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 69 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 69 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 65 |
