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Name : Smed_4143 (Smed_4143) Accession : YP_001312881.1 Strain : Genome accession: NC_009620 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 615053 - 616723 bp Length : 1671 bp Strand : + Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21644 putative ABC transporter ATP-binding protein DNA sequence : ATGGCTACGATCGAAAGCATTGTCCCGGCACCGGAAGAACGGCGTGACCGCCACACGAAGGAAGCGAGACCGGTCATCGA CGCCCGCCGGGTCGCCGTGAGCTTCAAGGTCGAAAACGGTGCGGTCGAGGCGGTGAAGGACGTCTCCTTCCAGCTCTATC GCGGAGAGACCGTGGCGATTGTCGGCGAATCCGGTTCCGGCAAGTCGGTGACGGCGCGCACCGTCATGGGACTCTTGTCG AAACGCGCTACGATCGCGCCGCAAGCGCGGATCGAATATGATGGCAAGGACGTGCTGAAATTTTCGAAGAGAGAACGCCG GGCGTTGCGCGGCGATCGCATTTCAATGATCTTTCAGGAGCCGATGAGCTCGTTGAACCCGGTCTATACGATCGGCAGTC AGATCGTCGAGGCGATCCGCGCCCATCGGCGCGTCGGCCGCCGCGCTGCTGCGGAGCGGGCGCTGGAGCTCTTGCGCCAC GTGCAGATCCCGGACCCGGAAGCGCGCCTGAACCAATACCCGCATCAGCTTTCCGGCGGTCAGCGCCAGCGTGTGATGAT TGCCATGGCACTTGCCAACGATCCGGACGTGCTGATCGCCGACGAGCCGACGACGGCGCTCGACGTCACCGTGCAGGCGC AGATTCTCAATCTCATCCGCAAGCTGCAGCAGGAACTCGGCATGGCGGTGATTTTGATCACCCATGACCTGACGGTGGTT CGCCAGTTTTCCGATTATGTCTATGTCATGCAGCTTGGAGAGGTGAAGGAACACAACACGACGGAAGCGCTCTTTGTCGA TCCGCAGCACGCTTATACGCGCCGGCTGCTTGCCTCAGAGCCGTCCGGCTCCGCCAATCCGCTGCCCGCCGACGCGCCGA TCATGCTCGACGGCAGAAACGTCCGCGTCTCCTTCACCTTGAAGAAGGGCGGGTTTTTCAGGCCGGAATACAAGGAGCTC ATCGCGGTGGACGGCCTCAGCCTCAATCTGCGTCGGCACGAGACGCTCGGGCTGGTCGGAGAGTCCGGTTCCGGCAAAAC CACCTTCGGTCAGGCGCTGATCCGGTTGATCAACACCGATGGCGGCGAAGTCTATTTCGAGGGCGAACCGATCCACGACA AAAACCGCAAGGCGATGCGGCCGCTTCGCTCGAAGATCCAGATCGTCTTTCAGGATCCTTTTTCCTCACTCAACCCCCGT ATGTCGGTCGGCCAGATCATCGAGGAAGGGCTGATCGTCAACGGCATTGGCGAAAGCCGCAAAGACAGGCTGAAGCGCGT CGAGGACGCGCTCGTCAGCGCCGGCATGCCCGCCAATATCCTGTCGCGCTTCCCGCACGAGTTCTCCGGCGGCCAGCGCC AGCGCATCGCGATCGCGCGCGCCATCGCGCTCGAGCCGGAATTCATTCTGCTCGACGAGCCGACCTCGGCGCTCGACCTG TCGGTGCAGGCGCAGATCATCGAGCTCCTGCGCCGGCTGCAGGACGAGCGGGGCCTGAGCTACCTCTTCATCTCCCATGA CCTGAAAGTTGTGCGGGCGCTCTGCCACCGCGTGGCGGTCATGCAGAACGGCAAGATCGTCGAAGAGGGGCCCGTAAGCG AAATTCTCAACAGACCCAAGACTGCCTACACGGAGCGGCTGGTAAAGGCCGCCTTCGAAGTGGCTGCGTGA Protein sequence : MATIESIVPAPEERRDRHTKEARPVIDARRVAVSFKVENGAVEAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLS KRATIAPQARIEYDGKDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIVEAIRAHRRVGRRAAAERALELLRH VQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADEPTTALDVTVQAQILNLIRKLQQELGMAVILITHDLTVV RQFSDYVYVMQLGEVKEHNTTEALFVDPQHAYTRRLLASEPSGSANPLPADAPIMLDGRNVRVSFTLKKGGFFRPEYKEL IAVDGLSLNLRRHETLGLVGESGSGKTTFGQALIRLINTDGGEVYFEGEPIHDKNRKAMRPLRSKIQIVFQDPFSSLNPR MSVGQIIEEGLIVNGIGESRKDRLKRVEDALVSAGMPANILSRFPHEFSGGQRQRIAIARAIALEPEFILLDEPTSALDL SVQAQIIELLRRLQDERGLSYLFISHDLKVVRALCHRVAVMQNGKIVEEGPVSEILNRPKTAYTERLVKAAFEVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 5e-96 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-71 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-71 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-71 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-71 | 42 |
