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Name : Smed_3988 (Smed_3988) Accession : YP_001312729.1 Strain : Genome accession: NC_009620 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 439834 - 441477 bp Length : 1644 bp Strand : + Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMb20141 putative oligopeptide ABC transporter ATP-binding protein DNA sequence : ATGGCTGAACATCTGCTCGAGGTCCGTAATCTCTCGGTCGAATTTCACACCGCGGCCGGCGTGGTGCACGCCGTAAAATC GATCTCCTATCACCTCGACAAGGGAGAGACGCTGGCCATCCTCGGCGAAAGCGGCTCCGGCAAGTCGGTATCTTCCTCGG CGATCATGAACCTCATCGACATGCCGCCGGGGCGCATCAGCGGCGGCGAAATCCTGCTCGACGGCAGGGACCTGCTGACG ATGCCAGCCGAGGAGCGGCGCGAGGTCAACGGCCGCCGGGTGGCCATGATCTTCCAGGATCCGCTCAGCCACCTCAATCC AGTCTACAGCGTCGGCTGGCAGATCGCGGAAGCCATGACCACCCATGGGCTCGCCGGCAGCAAGGCACGCGAGGAAGGAC TGCGGCTCCTTCGCCGCGTCGGAATTCCCGAGCCCGAGCGGGCAATGCGCAAATATCCGCACGAGTTCTCGGGTGGCCAG CGCCAGCGCGTCATGATCGCAATGGCGTTGGCGCTGCGGCCGGATCTCTTGATAGCAGACGAACCGACCACCGCACTCGA CGTGACCGTGCAGGCAGAAGTTCTAAAGCTTCTGAAGGAGCTGCAGCGCGAAACAGGTATGGCGGTGCTGATCATCACGC ACGATCTCGGCGTCGTGGCGGAAATCGCCGACCGGGTGGTCGTGATGGAGAAAGGCACCCTCGTCGAGGCGGGGACCGTC CGCGAGATCTACAAGAACCCGCAGCATCCCTATACGCGCAAGCTCATCGCCGCCGCCCCCGGAAAGGGCGTGATGCATGA GCCCGGCGCCCGCGCCGAGCCTCTGCTCAGCGTGCGCGACGTGCGCAAGACCTACGGCTCGTTCGAAGCACTGAAGGGCA TCTCCTTCGACCTGATGCCCGGCGAGACAATGGCGGTGGTCGGGGAAAGCGGATCCGGTAAATCGACCCTGGCCCGTGCA CTGCTTCGTCTCGACGAGCCGGACAGCGGCACTGCCTTGTGGAAGGGACGCGACCTTTTCGCGTTATCGCCTTCAGAGCT CTACAAGCTCCGGCGCGACCTCCAGATGGTGTTTCAGGACCCGACGCAGTCGCTCAATCCGCGCATGACGGTGTTTCAGC TGATCTCCGAAGCCTGGGTTATTCATCCGGACATTCTGCCCAAGGCAAGATGGCGCGAGCGCGTCGCGGAGCTCCTCGCG CAGGTCGGTCTTTCGGCCGAACACATGAGCCGCTATCCGCACCAGTTTTCCGGCGGCCAGCGCCAGCGCATCGCCATCGC CCGGGCGCTTGCACTCGAGCCGCAGTTGATCATCTGCGATGAAGCCGTCTCAGCGCTGGACGTCTCCGTGCAGGCGCAGG TGATCGAGCTTCTCGACAAGCTGCGGCGCGAAATGGGCATCGCCTTCATCTTCATCGCCCATGACCTTCCCGTCGTTCGT GATTTCGCCGATCACGTCATGGTCATGCAGCAGGGAGAAATCGTCGAGCTCGGCACCATCCGCGAGGTCTTCGAAACGCC GCGCCAGGCCTATACGCGTGCGCTCCTGGCGGCCAGTCTCAGTCCCGACCCCGACGCCAAAGCCGGTTGCCCTGAACCGC CGGCCGCCGACGCCGAAATTCTCATTCCGAAGCGGAGCCACTGA Protein sequence : MAEHLLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMPPGRISGGEILLDGRDLLT MPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQIAEAMTTHGLAGSKAREEGLRLLRRVGIPEPERAMRKYPHEFSGGQ RQRVMIAMALALRPDLLIADEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVAEIADRVVVMEKGTLVEAGTV REIYKNPQHPYTRKLIAAAPGKGVMHEPGARAEPLLSVRDVRKTYGSFEALKGISFDLMPGETMAVVGESGSGKSTLARA LLRLDEPDSGTALWKGRDLFALSPSELYKLRRDLQMVFQDPTQSLNPRMTVFQLISEAWVIHPDILPKARWRERVAELLA QVGLSAEHMSRYPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDKLRREMGIAFIFIAHDLPVVR DFADHVMVMQQGEIVELGTIREVFETPRQAYTRALLAASLSPDPDAKAGCPEPPAADAEILIPKRSH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-94 | 45 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-74 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-74 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-74 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-74 | 42 |
