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Name : Smed_3922 (Smed_3922) Accession : YP_001312665.1 Strain : Genome accession: NC_009620 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 373568 - 375655 bp Length : 2088 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGAATGTTTCGCAGCAGATCGAACCCCGCGCCGCCGCCTCGGAGCGCAACATGGCCGACGCCATCCGGTTTCTTTCCAT GGATGCCGTCGAGAAGGCCAATTCCGGTCATCCGGGCATGCCGATGGGCATGGCGGACGCGGTTACCGTGCTCTTCAACC GCTTCATCAGAATCGATCCGTCGCTCCCCGACTGGCCCGACCGCGACCGTTTCGTGCTTTCGGCCGGCCATGGCTCGATG CTGCTCTATTCCCTCCATCACCTCATCGGCTTTGCGGACATGCCGATGGCCGAGCTTTCGTCCTTCCGGCAACTCGGCTC GAAAACGGCCGGCCATCCCGAATACGGCCATGCCCTCGGCATCGAGACCACCACCGGCCCGCTGGGCCAGGGGATCTCGA CCGCTGTCGGGATGGCGATGGCCGAACAGATGATGGCCTCCCGGTTCGGCAGTGCTCTGTGCAACCACTTCACCTATGTC GTAGCCGGCGACGGCTGCCTTCAGGAAGGCATCAGCCACGAGGCTATCGACCTTGCCGGACATTTAAAGCTGCGCAAGCT GGTCGTGCTGTGGGACGACAACCGAATATCGATCGACGGATCGACGGATCTCTCTACCTCGATGAACCAGCTCGCGCGTT TCCGCGCCGCCAGCTGGGACGCCCAAGCCGTCGATGGCCACGACCCGGAAGCGGTTGCGAAAGCCCTGGAAAGAGCACGC CGGACCCGCAAGCCGTCGCTGATCGCCTGCCGCACCCGGATCGGCAAGGGTGCAGCCAGCATGGAAGGCTCGCACAAAAC CCACGGCGCGGCGCTCGGCGACAAGGAAATCGCAGCCACACGCGAAAAACTTGGCTGGCCGCATCCGCCCTTCTTCGTTC CGCCTGAGATAAGGGCTGCCTGGGCAAAGGTGGCGGCTCGAGGTCGCACGGCTCGCGAGGCCTGGGATATCCGCCTCGAC GCCTCGCGCTCGAAAAAGCGCTACGAGCAGACCATAAGGCGGCAGTTTGACGGCGAACTCGGCGATCTGCTTGCAAAATT CCGGAGCGCGCATCGCACAAGGGCTACGAAAGTTGCGACGCGTCAGGCCTCGCAGATGGCGCTGGAGGTCATAAACGGCG CGACCGCTTTGACGATCGGCGGCTCGGCCGACCTGACCGGCTCCAACCTGACGATGACCTCGCAGACCCAGCCCATCTCG CCGGGCAATTTCAAGGGCCGTTATCTGCATTACGGCATCCGCGAGCACGGCATGGCGGCCGCTATGAACGGCATCGCGCT TCATGGCGGCTTCATCCCCTATGGCGGCACTTTCCTGGTCTTCTCCGACTATGCCCGCGGTGCGATGCGCCTCTCGGCCC TGATGGGCCTGCCCGTCATTTACGTGCTGACGCATGATTCCATCGGGCTCGGCGAGGACGGACCGACCCACCAGCCGGTC GAGCATCTGGCCATGCTGCGCGCCACGCCCAACCTCAACGTTTTCCGGCCGGCCGACATCATCGAGACGGCAGAATGCTG GGAGATCGCGCTTGGCGAGAAGAATACGCCGAGCGTCCTCGCCCTTTCGCGTCAGGCCCTGCCGATGCTGCGCCGGACGG AAGGCAACGAGAACCAGTCGGCGCTCGGGGCGTATGTTCTGAGGGAAGCGCGCGGCAACCGGGACATCACGATCCTTGCC ACGGGATCCGAAGTCGAGATCGCCGTCGCTGCCGCCGAGCGCCTGCAGGCCGAGGAAGGCATCGCGGCGGCAGTGGTCTC CATGCCCTGCTGGGAGAAGTTCGAGGTTCAGGACCTTGCCTATCGGAGGAAGGTCCTCGGCGACGCGCCCCGCATCGCCA TCGAGGCGGCGGGCCGGCTCGGCTGGGACCGATGGATGGGGCCGGACGGTGCCTTCGTCGGCATGACCGGCTTTGGTGCC TCGGCACCGGCAGGCGACCTCTACCGGCATTTCGGCATTACCGCCGACCATGTCGTCGCAGAAGCCCTGGAGCTTCTCCG CCGCGCATACTCGGAAACTCTGCCCATAGGTGCCCGGATCGGTCCGCACCCATCCGCACACACCGTCAGATCATCGCAGG AGGCATGA Protein sequence : MNVSQQIEPRAAASERNMADAIRFLSMDAVEKANSGHPGMPMGMADAVTVLFNRFIRIDPSLPDWPDRDRFVLSAGHGSM LLYSLHHLIGFADMPMAELSSFRQLGSKTAGHPEYGHALGIETTTGPLGQGISTAVGMAMAEQMMASRFGSALCNHFTYV VAGDGCLQEGISHEAIDLAGHLKLRKLVVLWDDNRISIDGSTDLSTSMNQLARFRAASWDAQAVDGHDPEAVAKALERAR RTRKPSLIACRTRIGKGAASMEGSHKTHGAALGDKEIAATREKLGWPHPPFFVPPEIRAAWAKVAARGRTAREAWDIRLD ASRSKKRYEQTIRRQFDGELGDLLAKFRSAHRTRATKVATRQASQMALEVINGATALTIGGSADLTGSNLTMTSQTQPIS PGNFKGRYLHYGIREHGMAAAMNGIALHGGFIPYGGTFLVFSDYARGAMRLSALMGLPVIYVLTHDSIGLGEDGPTHQPV EHLAMLRATPNLNVFRPADIIETAECWEIALGEKNTPSVLALSRQALPMLRRTEGNENQSALGAYVLREARGNRDITILA TGSEVEIAVAAAERLQAEEGIAAAVVSMPCWEKFEVQDLAYRRKVLGDAPRIAIEAAGRLGWDRWMGPDGAFVGMTGFGA SAPAGDLYRHFGITADHVVAEALELLRRAYSETLPIGARIGPHPSAHTVRSSQEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 2e-145 | 50 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-142 | 48 |
