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Name : Smed_3834 (Smed_3834) Accession : YP_001312579.1 Strain : Genome accession: NC_009620 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 289638 - 290918 bp Length : 1281 bp Strand : - Note : TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMb20297 putative permease protein DNA sequence : ATGACGACGCTCTTTGGGGGCTGGTTTGCCCTTCTGGTCGCCGGTATGCCGGTCGGCTTTACGCTGATCGTGGCGGCGCT TGCCTATATGCTCTGGCAGGGAACGGGCCTGAACTTTGCCGGCCAGCGCATGATTGCCGGCCTCAACAGTTTTCCGCTGC TTGCCGTTCCCTTCTTCATTCTCACCGCGCAATTGATGAATCTTTCGGGCGTGACCGAGCGCATATTCGCCTTCGCCAAG GCTCTGGTCGGGCATGTCAGGGGCGGGCTCGGCCATGTAAACATCATGGCGAGCGTAATGTTCTCCGGCATGTCCGGTTC GGCAGTCGCCGATGCGGCGGGCCTCGGCCAGCTTGAGATCAAGGCGATGCGTGACGCCGGCTATGACGAGCAGTTTTCCG GTTCGGTGACCGCCGCATCGGCGATCATAGGTCCGCTGATTCCACCCTCCATTCCCCTCGTGGTTTATGGGGTGATCGCC AATACCTCGATAGGCGGCCTTTTCCTGGGCGGCATCGTGCCGGGCCTCCTCTGCGCAATCTCGCTGATGGTCATGGTTTA TGTGATCGCCTGGCGCCGGAACTACCCGACCGAAGAGCGCTCCAGCCTTCGCCGGATCTGGTCCACCTTCTGGCGTGCGC TGCTTCCGCTCATTACCCCGTTCATCATTATCGGCGGCATCTTTGCGGGGATATTCTCGCCGACCGAGGCCGCGGTGGTT GCAGCCAGCTATGCTCTCTTCCTCGGGGTCGTGGTCTACCGTGAAATTACCTTCGCCAAACTGGTGATTGTCTTGCGTGA GACCGTCAGCCATACGGCCGCCGTCGGCCTCCTCATCATGGGGGTGTCGCTGTTCGGCTATGTGATCGCACGGGAGCAGG TGCCTCAGCACGTCGCCGCGTTCTTCCTTGCGTATGCCGATGACCCGTTGACCTTTCTGATCCTGGTCAATCTCATGCTT CTCGCGCTCGGAACCTTCATAGAGGCGCTCGCCATCCTGCTTCTCATCGTGCCGGTACTGGTGCCGACCGCGCTTCAGTT CGGGGTGGATCCCGTCCATTTCGGTGTCATGGTCGTGTTCAACCTGATGATCGGCATTCTGACGCCGCCTATGGGTGTGG CGCTTTTCGTCGTGTCCAAGGTCGCCGATATTCCCTTCGGCCTGCTTGCACGCGGCATCCTGCCTCTGCTCGTTCCGCTC GTCCTCGTCCTGGTACTGATCACCCTGTTCCCCGCGCTCGTCACCTTCATACCCGACCAGATGCTCGGAGCTGCCCGATG A Protein sequence : MTTLFGGWFALLVAGMPVGFTLIVAALAYMLWQGTGLNFAGQRMIAGLNSFPLLAVPFFILTAQLMNLSGVTERIFAFAK ALVGHVRGGLGHVNIMASVMFSGMSGSAVADAAGLGQLEIKAMRDAGYDEQFSGSVTAASAIIGPLIPPSIPLVVYGVIA NTSIGGLFLGGIVPGLLCAISLMVMVYVIAWRRNYPTEERSSLRRIWSTFWRALLPLITPFIIIGGIFAGIFSPTEAAVV AASYALFLGVVVYREITFAKLVIVLRETVSHTAAVGLLIMGVSLFGYVIAREQVPQHVAAFFLAYADDPLTFLILVNLML LALGTFIEALAILLLIVPVLVPTALQFGVDPVHFGVMVVFNLMIGILTPPMGVALFVVSKVADIPFGLLARGILPLLVPL VLVLVLITLFPALVTFIPDQMLGAAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 7e-83 | 62 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 5e-83 | 62 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 7e-83 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Smed_3834 | YP_001312579.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 3e-83 | 62 |
