Gene Information

Name : Smed_4960 (Smed_4960)
Accession : YP_001313674.1
Strain :
Genome accession: NC_009620
Putative virulence/resistance : Virulence
Product : nucleotidyl transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : -
Position : 1472538 - 1473443 bp
Length : 906 bp
Strand : +
Note : PFAM: Nucleotidyl transferase; KEGG: sme:SMb20960 UDPglucose pyrophosphorylase protein

DNA sequence : 
ATGAACCATGTCAGGACCGTCAGAAAAGCAGTTATTCCAGTTGCAGGCAACGGGACCAGGTTCCTTCCCGCGACAAAGGC
AGTGCCGAAGGAGATGTTGACGATCGTCGACCGGCCGGTGGTTCAATATGCCGTGGACGAGGCCCGCCAGGCCGGGATCG
AGCATATTGTCTTCGTCACCAGCCGGAACAAGCAGGTGATCGAGGATCATTTCGACGACGCGCCGGAGCTCATCTCTTCG
CTTTCGCGCTCTGGCAAAAAGGCTCAGATTTCCGAACTCGAAGCCATGCTTCCGGCAGCAGGTTCGGTCAGCTTTACGCG
CCAGCAAGCCCCGCTCGGCCTCGGACATGCGGTGTGGTGCGCGCGCGACCTGATCGGCGACGAGCCCTTCGCACTTCTGC
TGCCGGACATGGTCTCGTTCGGCGCGCGCGGTTGCCTTGCCGGCCTCATGGACCTTTACAACGAAGCCGGCGGCAATGTC
GTCGGTGTCGAGCAATGTGCGCCCGAGGAAGCGTCGAAATACGGGATCGTCGGCAAGGGCGAGACGGTCCGGCACGGTTT
CGCCGTGACCGAGATGGTCGAAAAGCCCGCCGCCGGAAAGGCACCGTCCAACTACTATCTCAATGGCCGCTACATCCTGC
AGCCGGAAATCTTCTCGATCCTGGCACACCAGACGCGCGGCGCCGGCAACGAAATCCAGCTGACCGATGGCATGCTGACG
CTTTCGCAGTCGCAGTCCTTCCACGCGCATCCCTATGAAGGCCGTACCTTCGATTGTGGCGCGAAGCAGGGCTTCATCGA
GGCCAACGTCGCCTTCGCACTTGCGCGTGCGGATATAGGCGACCTCGTTTTTGAATCCGTCCGCGACATGGTTCTGTCTC
ACGAAAGCCGCATCCGCGCGGCATAA

Protein sequence : 
MNHVRTVRKAVIPVAGNGTRFLPATKAVPKEMLTIVDRPVVQYAVDEARQAGIEHIVFVTSRNKQVIEDHFDDAPELISS
LSRSGKKAQISELEAMLPAAGSVSFTRQQAPLGLGHAVWCARDLIGDEPFALLLPDMVSFGARGCLAGLMDLYNEAGGNV
VGVEQCAPEEASKYGIVGKGETVRHGFAVTEMVEKPAAGKAPSNYYLNGRYILQPEIFSILAHQTRGAGNEIQLTDGMLT
LSQSQSFHAHPYEGRTFDCGAKQGFIEANVAFALARADIGDLVFESVRDMVLSHESRIRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 3e-56 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smed_4960 YP_001313674.1 nucleotidyl transferase VFG0964 Protein 5e-52 42