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Name : Smed_4746 (Smed_4746) Accession : YP_001313476.1 Strain : Genome accession: NC_009620 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 1267446 - 1268729 bp Length : 1284 bp Strand : - Note : TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMb21351 putative C4-dicarboxylate large membrane transport protein DNA sequence : ATGGATATGATGATCCTCTTCGGCGTATTCACGCTGCTGATGCTGATCGGAACGCCGATCGCCTTCTGCCTCGGCGTCGC GTCCTTCGCGACCGTGCTCTATCTCGGCCTGCCGCCGCTGGTGATCTTTCAGCGGCTCAATTCCGGCATGAGCGTGTTCT CACTGCTTGCCATTCCGTTCTTCATCTATGCAGGGGACCTGATGGTGCGCGGCGGAATCGCCCAGAAAATAGTGGCCTTT GCGGCCTCGCTCGTCGGACACATCCGCGGCGGTCTCGGCCAGGTCAATATCGTCACTGCGACCTTGTTCGGGGGCATTTC GGGGTCCGCCGTGGCCGAAGCAGCGGCGGTGGGCGGGCTCATGATCCCGCAGATGAAGCAGCGCGGCTATGGCGCAGATT ACGCCGTCAACATTACATCGATGGCGGCTCTGATCGCGCTGATGCTGCCACCGTCGCACAACATGATCATCTACTCGATA TCGGCGGGCGGGAAGATCTCTATCGCAGATCTCTTCACCGCCGGTATCCTCCCCGGTCTCCTCTATGCGGCCGCGCTGAT GGTGACCGCCTATTTCGTCGCGCGGCGGCGGGGCTACCCGACGGAGGTCTTTCCCGGCTTCGCCAGGGTCGGCCGCTATC TGCTGGTCTCGACGCCCGGCCTCCTGCTCATCGGCATCATCTTCGGTGGCGTACGTTCGGGTGTGTTCACTGCGACCGAA AGTTCCTGCATCGCCGTTCTCTATGCGCTCGCGGTAACCGTCTTCGTCTATCGGCAGATGACCTGGCGCGATTTCGTCCA GGCCACATTCGCGGCCGTGCGCACGACGGCCATGGTCCTGCTCATCATCGGCATGGCGGCCGCCTTTTCCTGGCTGATGG CATTCCTGAGAGTGCCTGCAGCGCTGATCGACTGGATGAACACGATTTCGGAGAATCCGATCATCGTTCTCCTTTTGCTC AATGTCCTGATGCTGTTTCTAGGAACCTTCATGGACATGGGGCCCACCATCATAATCTGCACGCCGATTTTCCTGCCGGT GGCCATGGCCTACGGCGTCGATCCGGTTCATTTCGGCGTCATCATGATCCTGAACTTCGGCATCGGCCTGAACACACCGC CGGTAGGGGCCGTGCAGTTTGTGGCCTGCGCAGTCGGAAAAATCTCCGTCTGGGAGGCGATGCGCAGCATCTGGCCCTTC TACATGGCGGGGTTGATCGTCCTTGGGCTCGTCACCTATGTTCCGGCCCTTTCGCTATGGCTGCCAGCCGTCTTCAAAGG GTGA Protein sequence : MDMMILFGVFTLLMLIGTPIAFCLGVASFATVLYLGLPPLVIFQRLNSGMSVFSLLAIPFFIYAGDLMVRGGIAQKIVAF AASLVGHIRGGLGQVNIVTATLFGGISGSAVAEAAAVGGLMIPQMKQRGYGADYAVNITSMAALIALMLPPSHNMIIYSI SAGGKISIADLFTAGILPGLLYAAALMVTAYFVARRRGYPTEVFPGFARVGRYLLVSTPGLLLIGIIFGGVRSGVFTATE SSCIAVLYALAVTVFVYRQMTWRDFVQATFAAVRTTAMVLLIIGMAAAFSWLMAFLRVPAALIDWMNTISENPIIVLLLL NVLMLFLGTFMDMGPTIIICTPIFLPVAMAYGVDPVHFGVIMILNFGIGLNTPPVGAVQFVACAVGKISVWEAMRSIWPF YMAGLIVLGLVTYVPALSLWLPAVFKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-48 | 41 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-48 | 41 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 3e-48 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Smed_4746 | YP_001313476.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 1e-48 | 41 |
