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Name : Smed_4688 (Smed_4688) Accession : YP_001313418.1 Strain : Genome accession: NC_009620 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 1204404 - 1206005 bp Length : 1602 bp Strand : + Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMb21199 putative oligopeptide uptake ABC transporter ATP-binding protein, consisting of 2 fused ATP-binding domains DNA sequence : ATGACAGAGATGCAAGACGCCATTCTCGCGGTCCGTGGTCTCAAGGTCGATTTCTCGACGCCCGATGGGACCGTCGAAGC GGTAAAGGGAATCGATCTCGACGTCCGTTCCGGCGAGACTCTCGCCGTCGTCGGCGAATCCGGCTCGGGCAAAAGCCAAA CCATGATGGGTATCATGGGCCTGCTCGCCAACAACGGAACGGTGACCGGCTCGGCGCTTTACCGCGGCCAGGAGCTCGTG GGTCTTCCGCCGAAGGCCCTGAACAGAGTGCGCGGCTCGAAGATCACGATGATCTTCCAGGAGCCGATGACCTCGCTCGA TCCGCTCTACACGATCGGTCGCCAGATCGCCGAGCCGATCGTCCATCACCGCGGCGGTACGTTCAAGGGTGCGCGCAAGC GCGTTCTCGAACTCCTGGAGCTCGTCGGCATTCCCGAAGCGCAGCGCCGCATCGACAGCTACCCGCATGAGCTCTCCGGC GGTCAGCGTCAGCGCGTCATGATCGCCATGGCGCTTGCCAACGAGCCGGATATCCTGATTGCCGACGAACCGACGACCGC CCTGGACGTGACCATCCAGGCCCAGATCCTCGATTTGCTCAAGGCGCTGCAAACGCGTTTCGGCATGGCCATCGTGCTGA TCACGCACGACCTTGGGATTGTCAAACACTTCGCCGAGCGGGTCGCGGTCATGCGCCGCGGCGAGGTTGTGGAGCAGGGC ACGACGGCCGACATCTTCGAGCGGCCGGAGGCGGACTACACCAGAATGCTGCTGGAGGCAGAGCCGAGCGGACACAAGGC TCCGCCCCCGGACAATGCACCGATCATCCTCGAGGGGCGCAATGTCGGGGTCGACTATACGATCCCCGGCGGCCTCTTCC GGGGCGCCTCGACCGCCTTCCGGGCCGTCGACGGCGTAAGCCTGAGGCTCAGGCAAGGCCAGACGATCGGCATTGTCGGC GAATCCGGTTCGGGTAAGTCGACGCTCGGACGGGCGCTGCTGAGGCTTTTGCCGAGTAGCGGTTACTATCGCTTTGGTTC CACGGATATTTCGGGATTTGACCGCGGCGCGATGCGGCCACTGCGCCGCCAGCTGCAGCTCGTATTTCAGGATCCTTACG GATCGCTCTCGCCGCGCCGGACCGTCGGCGAGATCATTACCGAAGGCCTTCATGTGCATGAGCCCGACTTGAGCCGCGCC GACCGCGACCGGCGGGCCATCGCCGCACTGAAGGAGGTCGGCCTCGATCCCGCCTCGCGCAACCGCTATCCGCATGAATT CTCCGGCGGCCAGCGCCAGCGCATCGCAATTGCCCGCGCGATTATCCTGAAACCCAAGGTCGTCATTCTCGATGAACCGA CCTCAGCCCTCGATCGATCGGTACAGGGGCAGGTGATCGCACTCCTGCGCGATCTGCAGGAGAAGCACGGTCTTTCCTAC ATCTTCATCAGCCACGATCTGTCAGTCGTGAAGGCGATGTCCGACTATGTGATCGTGATGAAAAACGGCCGCATCGTCGA AGAGGGGGAAACTGACGCGATTTTCAAGGCGCCGCGGGAGCCCTACACGAAGACGCTGATCGGCGCGGCATTCAACGTGT GA Protein sequence : MTEMQDAILAVRGLKVDFSTPDGTVEAVKGIDLDVRSGETLAVVGESGSGKSQTMMGIMGLLANNGTVTGSALYRGQELV GLPPKALNRVRGSKITMIFQEPMTSLDPLYTIGRQIAEPIVHHRGGTFKGARKRVLELLELVGIPEAQRRIDSYPHELSG GQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKALQTRFGMAIVLITHDLGIVKHFAERVAVMRRGEVVEQG TTADIFERPEADYTRMLLEAEPSGHKAPPPDNAPIILEGRNVGVDYTIPGGLFRGASTAFRAVDGVSLRLRQGQTIGIVG ESGSGKSTLGRALLRLLPSSGYYRFGSTDISGFDRGAMRPLRRQLQLVFQDPYGSLSPRRTVGEIITEGLHVHEPDLSRA DRDRRAIAALKEVGLDPASRNRYPHEFSGGQRQRIAIARAIILKPKVVILDEPTSALDRSVQGQVIALLRDLQEKHGLSY IFISHDLSVVKAMSDYVIVMKNGRIVEEGETDAIFKAPREPYTKTLIGAAFNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-96 | 44 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-76 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-76 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 6e-76 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-76 | 43 |
