Gene Information

Name : Cbei_0629 (Cbei_0629)
Accession : YP_001307772.1
Strain : Clostridium beijerinckii NCIMB 8052
Genome accession: NC_009617
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 748519 - 749679 bp
Length : 1161 bp
Strand : +
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cac:CAC0930 cystathionine gamma-synthase

DNA sequence :
ATGAAAATAGAATCATTATTAGTTCATGGTGCAATTGATGGGGATGAGACAACAGGATCGGTGAATGTTCCAATCTATCA
AACTTCCACATATAAGCAAGAACAGTTAGGTAAAAATAAAGGATATGAATATTCAAGGACTGGAAATCCGACAAGGGAAG
CATTAGAGAAAACCATTGCCTTGTTAGAAAGTGGAAGCGGTGGACTTGCATTTAGCAGCGGAATGGCTGCTATTACGGCT
GTTTTATCTTTATTTCATAGCGGTGACAAAGTGATAATTCCAAGTAATCTTTATGGAGGAACTTTTAGAGTAATTGATAA
AGTATTTAAGAATTTTAATCTTCAATATGAGATAGTTGACTTTTCTAGACTAAATGATGTAAAAAGAATTTTAGAAAATG
GAAAAGACAACTCAAGTATAAAGGCCGTTTTTATTGAAACTCCAACAAATCCGCTCATGGATATTACTGATATAGAAGAG
GTTAGTAAGCTTGCAAAGGAATATGGAGCACTTACTGTTGTAGATAATACGTTTATGTCACCATATTTGCAAAGACCTTT
AGAATTTGGAGCGGATATTGTTGTTCATAGTGCTACTAAGTATTTAGGAGGTCATAGTAATGTAGTAGCTGGATTAATAG
CTGTAAATAATGATGAGCTTTGGGACAAGTTACACTTTATACAAAATTCAACGGGAGGAGTACTTGGACCATTTGATTCG
TTTATATTGCTTCAAGGCATAAAAACTTTAGGTGTTAGATTGGATAGGCACAATGAAAATGCAGAGAAAATAGCACAATT
TTTATCACAAAGTGAATATATAACTAAAATTTATTATCCAGGAATAAAGGATTCGAAAGGATATGAAATTCATAAGAAAC
AAGCATCTGGCTTTGGGGGAGTATTGTCTTTTGTTATAAATGAAAAGATAGATTACAAAAAGTTTCTAAGTTCACTAAGA
CTTATAACTTTAGGAGAAAGCCTAGGTGGGGTGGAATCTTTAATATGTCACCCAGCTAGCATGACACATGCAGCAATTCC
ATATAAAATAAGGCAGGAGGTTGGAATTGTGGATAATCTAGTTAGGTTGTCAGTAGGGATAGAAAATATTGATGATCTAA
TTGAGGACTTAAACAATGCATTTAAGGAGAGTTTGATATGA

Protein sequence :
MKIESLLVHGAIDGDETTGSVNVPIYQTSTYKQEQLGKNKGYEYSRTGNPTREALEKTIALLESGSGGLAFSSGMAAITA
VLSLFHSGDKVIIPSNLYGGTFRVIDKVFKNFNLQYEIVDFSRLNDVKRILENGKDNSSIKAVFIETPTNPLMDITDIEE
VSKLAKEYGALTVVDNTFMSPYLQRPLEFGADIVVHSATKYLGGHSNVVAGLIAVNNDELWDKLHFIQNSTGGVLGPFDS
FILLQGIKTLGVRLDRHNENAEKIAQFLSQSEYITKIYYPGIKDSKGYEIHKKQASGFGGVLSFVINEKIDYKKFLSSLR
LITLGESLGGVESLICHPASMTHAAIPYKIRQEVGIVDNLVRLSVGIENIDDLIEDLNNAFKESLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-85 49
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-86 49
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 7e-70 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cbei_0629 YP_001307772.1 cystathionine gamma-synthase BAC0207 Protein 2e-64 41