Gene Information

Name : araD (Cbei_0549)
Accession : YP_001307693.1
Strain : Clostridium beijerinckii NCIMB 8052
Genome accession: NC_009617
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : -
Position : 658277 - 658966 bp
Length : 690 bp
Strand : +
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGTTAGAAGAATTAAAGAAACAAGTTTTAAAGGCAAATTTAGAATTACCAGCAAAGAAACTTATAACTTATACATGGGG
AAATGTTAGTGGGATTGATAGAAGTACTGGATTAGTGGTAATAAAACCAAGTGGTGTTGAGTATGATAATATGACTTTAG
AAGATTTAGTAGTTGTAGACTTAGAAGGAAACGTAGTTGAAGGTAGTTTAAAGCCTTCATCAGATACACCAACACATTTA
GAACTATATAAAGAGTTTGATGAAATAGGTGGAATTGTTCATACACATTCAACTTGGGCTACTATATGGGCGCAAATAGG
AAGAGCTATACCAGCTTGTGGAACAACACACGCAGATTATTTTTATGGAAGTATACCATGCACAAGGAAAATGACTAAGG
AAGAAATAAGTAGAGCTTATGAAAAGGAAACAGGAACAGTTATAATTGAAGAAATAACAGGAAACAATCCGTTACACTGT
CCAGGTGTAGTTGTAAATGATCATGGTCCATTTGCATGGGGAAAAAATGCAGAAGAAGCTGTTCATAATGCCGTAGTTAT
GGAAGAAGTTGCGAAGATGGCATATTTCACTGAATTGTTGAGTCCAGACAATATTATGGACAAGATGCTTATGAATAAGC
ACTTTTTAAGAAAACATGGTAAAAATGCTTACTATGGACAAAGCAAGTAA

Protein sequence :
MLEELKKQVLKANLELPAKKLITYTWGNVSGIDRSTGLVVIKPSGVEYDNMTLEDLVVVDLEGNVVEGSLKPSSDTPTHL
ELYKEFDEIGGIVHTHSTWATIWAQIGRAIPACGTTHADYFYGSIPCTRKMTKEEISRAYEKETGTVIIEEITGNNPLHC
PGVVVNDHGPFAWGKNAEEAVHNAVVMEEVAKMAYFTELLSPDNIMDKMLMNKHFLRKHGKNAYYGQSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 1e-60 59