Gene Information

Name : Cbei_5085 (Cbei_5085)
Accession : YP_001312147.1
Strain : Clostridium beijerinckii NCIMB 8052
Genome accession: NC_009617
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 5983866 - 5984315 bp
Length : 450 bp
Strand : -
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cac:CAC3723 single strand DNA binding protein, SSB

DNA sequence : 
ATGAATAAAGTAGTTCTAATCGGAAGATTAACAAAAGATCCAGAACTAAGATTTACTCCAGGAAGTGGAGCAGCAGTAAC
AACCTTAACATTAGCAGTTGATAAATATAATACAAAAACTGGCCAAAGAGAAGCAGATTTTGTTCCTGTAGTAGTATGGG
GCAAACAAGCTGAGAGTACTGCTAATTACATGAGTAAAGGTAGCCAAGTGGCTATTAGTGGTAGAATCCAAACCAGAAGT
TATGATGCGAAAGACGGAACTAAGAGATATGTTACGGAAGTTGTAGCAGATCAATTTGGTGGAGTTGAATTCCTAGGAAG
TAAAGGAAGCAATTCATCAGGAAATAGTTTTGGTAATAGCAATGAATATTCAGCACCAGCGAATGATGCATTCAGTGGTG
GATTTGAAGAGGATATAACTCCGGTAGATGACGGAGATATGCCTTTCTAA

Protein sequence : 
MNKVVLIGRLTKDPELRFTPGSGAAVTTLTLAVDKYNTKTGQREADFVPVVVWGKQAESTANYMSKGSQVAISGRIQTRS
YDAKDGTKRYVTEVVADQFGGVEFLGSKGSNSSGNSFGNSNEYSAPANDAFSGGFEEDITPVDDGDMPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 1e-23 59
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 2e-23 59
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 3e-23 57
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 3e-23 53
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 1e-20 53
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 1e-22 52
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 3e-16 45
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 4e-16 45