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Name : Cbei_0439 (Cbei_0439) Accession : YP_001307583.1 Strain : Clostridium beijerinckii NCIMB 8052 Genome accession: NC_009617 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 531720 - 533897 bp Length : 2178 bp Strand : + Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: cpr:CPR_2136 transcription accessory protein DNA sequence : ATGAATTCAATTGAAGAAAGAATCGCAAAAGAATTAGAAATAAAGTTAAGCCAGGTTCAAAATGTTATTGGACTTTTAGA TGATGGAAATACAGTTCCATTTATTTCAAGATATAGAAAAGAAGCAACAGGAGGACTTTCAGATGAAGTCTTAAGAAAAT TATCTGAAAGACTTACGTATCTAAGAAATTTAGAGGAAAGAAAAGCTGATGTTACAAGGCTTATACAAGAACAAGAAAAA TATACTAATGAAATAGGAAAAGCATTAGAGAATGCAACGACTTTAACAGAAGTTGAAGATATATATAGACCTTTTAAACC TAAAAAGAGAACAAAAGCAACAATAGCAGTAGAAAAGGGATTAAAGCCTCTTGCAGAACTAATTTTGGAAGGAAAATTAA GTGGAGACCTAGATGAAGAGGCAGCTAAGTATATAAGTGAAGAAAAGGGAGTTACAAATAGTCAAGAAGCTATCCAAGGA GCTTTAGATATAATAGCTGAAAGCATTTCTGATGAAGCTAAGTACAGAAAGTATATAAGAGAATTTGTTATTAGAGAAGG TAATATAGAATCAAAGGGAAGTTCAGATGAACCAACTCCATATGAAATGTATTATGAATATTCTGAAGCAGTAAATAAGA TACCGCCTCATAGAATATTAGCCATAAACAGAGGAGAAAAAGAAAAAATCCTAAATGTTAAGATAACTGTTAATGAAGAC AAGATAATTCAATACTTAGAAAATCAAGTATTAAAAGGCAATGAAACTTTAGATGAAAAATTAAAACTTGCAATTAGAGA TTCGTTAAAAAGATTAATTTATCCATCAATAGAAAGAGAAATAAGAAGTGAATTAACTGATATAGGTGAAGAAGGTGCTA TTAAGATATTTAAAGAAAACTTGAAAGCATTGTTATTACAAGCGCCTATTAAAGGAAAAGTAGTAATGGGATATGACCCA GGGTTTAGAACTGGCTGTAAAATAGCGATTCTAGATGCAACAGGGAAGTTTTTGGAAAATACAGCAGTATATCCTACAGT GCCTAAAAGAGACATCGAAGGAACAAAGAAAACTTTAAAAGCTCTTATTGCTAAGCATAATGTTGATGTTATATCCCTTG GAAATGGTACAGCATCAAGAGAATCAGAAGAAGTCATCGCAGAAATGATTACGGAAATAAAAAATGAAACTGGAAAAGAA TTAGCATATGTAATAGTATCTGAAGCAGGAGCGTCAGTTTATTCAGCATCAGAACTTGCAACTAAGGAATATCCAGATTT AGATGTTACAGTAAGAGGAGCAATTTCAATAGGAAGAAGGTTGCAAGATCCACTTGCGGAACTAGTTAAGATAGATCCTA AGGCTATAGGAGTAGGACAATATCAGCACGATGTCGCTCCTAAAAAGTTAGAAGAATCCTTAGCAGGTGTAGTAGAAGAT TCAGTTAACACTGTTGGAGTTGACTTAAATATAGCAACACCATCGCTTTTAACACATATTTCGGGAATAAATGCATCTAT CGCTAAAAATATTGTTGACTATAGAGAAGAAGTAGGAAGATTCACTTCAAGAAAAGAACTATTAAAAGTTAAGAGATTAG GTCAAAAGGCTTATGAGCAATGTGCTGGATTTTTAAGAGTTGATGATAGCAAAGAACCTTTGGATAATACATCTGTGCAT CCAGAGTCTTATGCTATAGCTAAGAAGCTAATAGAATTACTTGGTTACAATAAAGAAGACCTTAAGAATAATAAATTAGG TGACATTGATGAAAGGGCTCAATCTCAAGGATTAAAAAAACTAAGTGAAACATTGGAAGTTGGAGAGATGACTCTAAAGG ATATAATAAAAGAATTAAAGAAGCCAGGCAGAGATCCTAGAGAAGAAATGCCAAAGCCAATACTAAAAACGGGAATAATA GAACTTAAGGACTTAAAACCTGGTATGGTTTTAGCTGGAACTGTTAGGAATGTATCTGATTTTGGAGCATTTGTAGATAT AGGAGTGCATCAAGATGGATTAGTTCACAAAAGTCAAATGGCAAATAGATTTGTAAAGCATCCTTTAGATATAGTTAAAG TTGGAGATATAGTAAAGGTAGCGATATTGGAAGTTGATGAAAAGAGAAAGAGAATATCATTAACTATGAAAGATATTGAT GAATCAGCAGAAGTATAG Protein sequence : MNSIEERIAKELEIKLSQVQNVIGLLDDGNTVPFISRYRKEATGGLSDEVLRKLSERLTYLRNLEERKADVTRLIQEQEK YTNEIGKALENATTLTEVEDIYRPFKPKKRTKATIAVEKGLKPLAELILEGKLSGDLDEEAAKYISEEKGVTNSQEAIQG ALDIIAESISDEAKYRKYIREFVIREGNIESKGSSDEPTPYEMYYEYSEAVNKIPPHRILAINRGEKEKILNVKITVNED KIIQYLENQVLKGNETLDEKLKLAIRDSLKRLIYPSIEREIRSELTDIGEEGAIKIFKENLKALLLQAPIKGKVVMGYDP GFRTGCKIAILDATGKFLENTAVYPTVPKRDIEGTKKTLKALIAKHNVDVISLGNGTASRESEEVIAEMITEIKNETGKE LAYVIVSEAGASVYSASELATKEYPDLDVTVRGAISIGRRLQDPLAELVKIDPKAIGVGQYQHDVAPKKLEESLAGVVED SVNTVGVDLNIATPSLLTHISGINASIAKNIVDYREEVGRFTSRKELLKVKRLGQKAYEQCAGFLRVDDSKEPLDNTSVH PESYAIAKKLIELLGYNKEDLKNNKLGDIDERAQSQGLKKLSETLEVGEMTLKDIIKELKKPGRDPREEMPKPILKTGII ELKDLKPGMVLAGTVRNVSDFGAFVDIGVHQDGLVHKSQMANRFVKHPLDIVKVGDIVKVAILEVDEKRKRISLTMKDID ESAEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 7e-151 | 46 |
