Gene Information

Name : Cbei_4878 (Cbei_4878)
Accession : YP_001311940.1
Strain : Clostridium beijerinckii NCIMB 8052
Genome accession: NC_009617
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 5712061 - 5712402 bp
Length : 342 bp
Strand : -
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cpr:CPR_0274 single-strand binding protein family

DNA sequence :
ATGAATAAGATAATATTATTAGGAAGATTAGTTAAAGACCCTGAACTTAGGCACACTGAAAATGGAGAAAAAATTTATAC
CAAGTTTACAATTGCTGTGCAACGAAATTTTAGATTACCTGATGGAATTAGAGAAGCGGATTTTATACCTATAAAAGTTT
GGGGAAAAAAAGCTGAAGTTATAGTAAAATATATGAAAAAGGGAAGCCTTATTACTTTAAGCGGTAGATTAAGAACTGGT
AGTTATGAGGATAAGGAGGGAAATAGAAAGTATATAGCAGAGGTTATAGCAGAAGATTTTAAGTTTCTTGAGAATAAGAA
AAGTCAAACTGAGGCGTTGTAA

Protein sequence :
MNKIILLGRLVKDPELRHTENGEKIYTKFTIAVQRNFRLPDGIREADFIPIKVWGKKAEVIVKYMKKGSLITLSGRLRTG
SYEDKEGNRKYIAEVIAEDFKFLENKKSQTEAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 2e-22 50
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 2e-20 50
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 3e-22 50
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 3e-22 50
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-24 50
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-22 49
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 6e-23 44
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 4e-23 44
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 7e-21 42
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 1e-18 42
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 8e-19 42
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 6e-18 41